Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 AC005332.10-201ENST00000612725 619 ntBASIC3.22□□□□□ -1.89
SHC1P29353 MIR7844-201ENST00000616161 122 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.22□□□□□ -1.89
SHC1P29353 AC092650.2-201ENST00000619984 902 ntBASIC3.22□□□□□ -1.89
SHC1P29353 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AC026634.1-201ENST00000634369 198 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AL392088.2-201ENST00000637607 285 ntBASIC3.22□□□□□ -1.89
SHC1P29353 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SHC1P29353 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SHC1P29353 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SHC1P29353 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SHC1P29353 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 RPL21P132-201ENST00000331267 462 ntBASIC3.21□□□□□ -1.9
SHC1P29353 Y_RNA.25-201ENST00000362528 102 ntBASIC3.21□□□□□ -1.9
SHC1P29353 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AP002088.1-201ENST00000382740 395 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 MTCO3P30-201ENST00000426425 670 ntBASIC3.21□□□□□ -1.9
SHC1P29353 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC010881.1-201ENST00000433830 235 ntBASIC3.21□□□□□ -1.9
SHC1P29353 HSPD1P21-201ENST00000436541 245 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC241584.1-201ENST00000438469 1241 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AL512286.1-201ENST00000439244 400 ntBASIC3.21□□□□□ -1.9
SHC1P29353 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 RPL23AP15-201ENST00000450202 459 ntBASIC3.21□□□□□ -1.9
SHC1P29353 SLC31A1P1-201ENST00000451221 567 ntBASIC3.21□□□□□ -1.9
SHC1P29353 MTCO3P11-201ENST00000455103 774 ntBASIC3.21□□□□□ -1.9
SHC1P29353 HMGB3P30-201ENST00000457863 606 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 snoU13.7-201ENST00000459220 104 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 AC116337.2-201ENST00000477662 156 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
SHC1P29353 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 AC108078.3-201ENST00000502633 489 ntBASIC3.21□□□□□ -1.9
SHC1P29353 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 AF213884.2-201ENST00000510417 903 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.21□□□□□ -1.9
SHC1P29353 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 SLC2A13P1-201ENST00000531560 322 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AP000873.5-201ENST00000533906 236 ntBASIC3.21□□□□□ -1.9
SHC1P29353 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.21□□□□□ -1.9
SHC1P29353 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.21□□□□□ -1.9
SHC1P29353 MIR4429-201ENST00000580105 73 ntBASIC3.21□□□□□ -1.9
SHC1P29353 ZNF415P1-201ENST00000582279 1166 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.21□□□□□ -1.9
SHC1P29353 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 AC010591.1-201ENST00000603941 649 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC087752.4-201ENST00000605911 462 ntBASIC3.21□□□□□ -1.9
SHC1P29353 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.21□□□□□ -1.9
SHC1P29353 AC010678.1-201ENST00000614118 713 ntBASIC3.21□□□□□ -1.9
SHC1P29353 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.21□□□□□ -1.9
SHC1P29353 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SHC1P29353 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHC1P29353 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.21□□□□□ -1.9
SHC1P29353 OR5BR1P-201ENST00000524992 1330 ntBASIC3.2□□□□□ -1.9
SHC1P29353 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SHC1P29353 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SHC1P29353 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.2□□□□□ -1.9
SHC1P29353 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.2□□□□□ -1.9
SHC1P29353 RNU6-657P-201ENST00000383904 107 ntBASIC3.2□□□□□ -1.9
SHC1P29353 Y_RNA.517-201ENST00000384551 106 ntBASIC3.2□□□□□ -1.9
SHC1P29353 MTCO3P31-201ENST00000405526 789 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RN7SKP53-201ENST00000411337 315 ntBASIC3.2□□□□□ -1.9
SHC1P29353 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms