Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
CD44P16070 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CD44P16070 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CD44P16070 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CD44P16070 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CD44P16070 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.15□□□□□ -1.27
CD44P16070 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.15□□□□□ -1.27
CD44P16070 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 RNU6-942P-201ENST00000363002 107 ntBASIC7.14□□□□□ -1.27
CD44P16070 RNU4-10P-201ENST00000364383 140 ntBASIC7.14□□□□□ -1.27
CD44P16070 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 RNU6-281P-201ENST00000384212 103 ntBASIC7.14□□□□□ -1.27
CD44P16070 SNORA8.3-201ENST00000384679 139 ntBASIC7.14□□□□□ -1.27
CD44P16070 MIR616-201ENST00000385293 97 ntBASIC7.14□□□□□ -1.27
CD44P16070 AL136100.1-201ENST00000407696 330 ntBASIC7.14□□□□□ -1.27
CD44P16070 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CD44P16070 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.14□□□□□ -1.27
CD44P16070 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CD44P16070 AC092967.1-201ENST00000449016 481 ntBASIC7.14□□□□□ -1.27
CD44P16070 SUMO2P6-201ENST00000505273 288 ntBASIC7.14□□□□□ -1.27
CD44P16070 MRPS33P2-201ENST00000507850 322 ntBASIC7.14□□□□□ -1.27
CD44P16070 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CD44P16070 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CD44P16070 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC7.14□□□□□ -1.27
CD44P16070 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 RN7SL475P-201ENST00000583379 298 ntBASIC7.14□□□□□ -1.27
CD44P16070 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 AL139395.1-201ENST00000603662 160 ntBASIC7.14□□□□□ -1.27
CD44P16070 AC025588.3-201ENST00000604182 274 ntBASIC7.14□□□□□ -1.27
CD44P16070 AL161629.2-201ENST00000615347 275 ntBASIC7.14□□□□□ -1.27
CD44P16070 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
CD44P16070 AL132640.3-201ENST00000630473 177 ntBASIC7.14□□□□□ -1.27
CD44P16070 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.14□□□□□ -1.27
CD44P16070 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.14□□□□□ -1.27
CD44P16070 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CD44P16070 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CD44P16070 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.14□□□□□ -1.27
CD44P16070 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CD44P16070 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.13□□□□□ -1.27
CD44P16070 THAP12P9-201ENST00000503971 2360 ntBASIC7.13□□□□□ -1.27
CD44P16070 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.13□□□□□ -1.27
CD44P16070 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC7.13□□□□□ -1.27
CD44P16070 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 RNU6-384P-201ENST00000364900 104 ntBASIC7.13□□□□□ -1.27
CD44P16070 SNORA72.2-201ENST00000365028 127 ntBASIC7.13□□□□□ -1.27
CD44P16070 RNU6-728P-201ENST00000365375 104 ntBASIC7.13□□□□□ -1.27
CD44P16070 RNU6-356P-201ENST00000384140 107 ntBASIC7.13□□□□□ -1.27
CD44P16070 RNY1P7-201ENST00000384743 110 ntBASIC7.13□□□□□ -1.27
CD44P16070 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CD44P16070 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 AL353133.1-201ENST00000407695 401 ntBASIC7.13□□□□□ -1.27
CD44P16070 HMGB1P27-201ENST00000431429 603 ntBASIC7.13□□□□□ -1.27
CD44P16070 AC138761.5-201ENST00000433967 325 ntBASIC7.13□□□□□ -1.27
CD44P16070 AC006028.1-201ENST00000438379 402 ntBASIC7.13□□□□□ -1.27
CD44P16070 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.13□□□□□ -1.27
CD44P16070 RN7SL372P-201ENST00000461982 298 ntBASIC7.13□□□□□ -1.27
CD44P16070 OR2AO1P-201ENST00000476497 403 ntBASIC7.13□□□□□ -1.27
CD44P16070 IGBP1P1-201ENST00000554337 1009 ntBASIC7.13□□□□□ -1.27
CD44P16070 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.13□□□□□ -1.27
CD44P16070 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.13□□□□□ -1.27
CD44P16070 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.13□□□□□ -1.27
CD44P16070 MIR5695-201ENST00000579717 85 ntBASIC7.13□□□□□ -1.27
CD44P16070 RN7SL32P-201ENST00000580514 281 ntBASIC7.13□□□□□ -1.27
CD44P16070 AC090241.1-201ENST00000587732 621 ntBASIC7.13□□□□□ -1.27
CD44P16070 AL352984.2-201ENST00000611153 546 ntBASIC7.13□□□□□ -1.27
CD44P16070 U1.41-201ENST00000617626 165 ntBASIC7.13□□□□□ -1.27
CD44P16070 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.13□□□□□ -1.27
CD44P16070 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
CD44P16070 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 PROS2P-201ENST00000474651 1951 ntBASIC7.13□□□□□ -1.27
CD44P16070 DOCK11P1-201ENST00000553480 5932 ntBASIC7.13□□□□□ -1.27
CD44P16070 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CD44P16070 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CD44P16070 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.13□□□□□ -1.27
CD44P16070 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
CD44P16070 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.12□□□□□ -1.27
CD44P16070 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CD44P16070 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CD44P16070 CENPCP1-201ENST00000533085 2578 ntBASIC7.12□□□□□ -1.27
CD44P16070 MIR494-201ENST00000349529 81 ntBASIC7.12□□□□□ -1.27
CD44P16070 RNU6-428P-201ENST00000362942 107 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms