Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.53□□□□□ -2
CD74P04233 MTCO1P12-201ENST00000414273 1543 ntBASIC2.53□□□□□ -2
CD74P04233 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CD74P04233 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CD74P04233 RPL9P7-201ENST00000330965 580 ntBASIC2.53□□□□□ -2
CD74P04233 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CD74P04233 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD74P04233 SNORA9-201ENST00000384215 133 ntBASIC2.53□□□□□ -2
CD74P04233 AL023807.1-201ENST00000407932 359 ntBASIC2.53□□□□□ -2
CD74P04233 RPL19P1-201ENST00000411635 428 ntBASIC2.53□□□□□ -2
CD74P04233 AC063979.1-201ENST00000415539 377 ntBASIC2.53□□□□□ -2
CD74P04233 HSFY4P-201ENST00000415994 1181 ntBASIC2.53□□□□□ -2
CD74P04233 BOLA3P4-201ENST00000418151 400 ntBASIC2.53□□□□□ -2
CD74P04233 PTP4A1P7-201ENST00000423476 514 ntBASIC2.53□□□□□ -2
CD74P04233 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
CD74P04233 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.53□□□□□ -2
CD74P04233 RPL31P54-201ENST00000429803 370 ntBASIC2.53□□□□□ -2
CD74P04233 AC091862.1-201ENST00000438016 1100 ntBASIC2.53□□□□□ -2
CD74P04233 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.53□□□□□ -2
CD74P04233 RPS3AP12-201ENST00000443616 753 ntBASIC2.53□□□□□ -2
CD74P04233 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.53□□□□□ -2
CD74P04233 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.53□□□□□ -2
CD74P04233 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.53□□□□□ -2
CD74P04233 RN7SL601P-201ENST00000471221 293 ntBASIC2.53□□□□□ -2
CD74P04233 AC026414.1-201ENST00000504046 698 ntBASIC2.53□□□□□ -2
CD74P04233 MLLT10P2-201ENST00000506434 249 ntBASIC2.53□□□□□ -2
CD74P04233 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.53□□□□□ -2
CD74P04233 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.53□□□□□ -2
CD74P04233 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.53□□□□□ -2
CD74P04233 AC087897.1-201ENST00000550134 156 ntBASIC2.53□□□□□ -2
CD74P04233 AC125611.2-201ENST00000551907 647 ntBASIC2.53□□□□□ -2
CD74P04233 AADACP1-206ENST00000561502 1193 ntBASIC2.53□□□□□ -2
CD74P04233 AC093519.1-201ENST00000566109 298 ntBASIC2.53□□□□□ -2
CD74P04233 MIR5186-201ENST00000577504 120 ntBASIC2.53□□□□□ -2
CD74P04233 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.53□□□□□ -2
CD74P04233 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CD74P04233 MIR3922-201ENST00000585192 84 ntBASIC2.53□□□□□ -2
CD74P04233 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.53□□□□□ -2
CD74P04233 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.53□□□□□ -2
CD74P04233 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.53□□□□□ -2
CD74P04233 XIAPP1-201ENST00000603162 600 ntBASIC2.53□□□□□ -2
CD74P04233 PRELID3BP8-201ENST00000604148 295 ntBASIC2.53□□□□□ -2
CD74P04233 AL161756.2-201ENST00000604597 246 ntBASIC2.53□□□□□ -2
CD74P04233 AC012468.1-201ENST00000604888 430 ntBASIC2.53□□□□□ -2
CD74P04233 AP002802.2-201ENST00000605877 235 ntBASIC2.53□□□□□ -2
CD74P04233 AC090115.4-201ENST00000609970 188 ntBASIC2.53□□□□□ -2
CD74P04233 AC007318.2-201ENST00000620999 243 ntBASIC2.53□□□□□ -2
CD74P04233 AL138955.1-201ENST00000622881 1040 ntBASIC2.53□□□□□ -2
CD74P04233 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.53□□□□□ -2
CD74P04233 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.53□□□□□ -2
CD74P04233 MIR622-201ENST00000638396 96 ntBASIC2.53□□□□□ -2
CD74P04233 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
CD74P04233 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.53□□□□□ -2
CD74P04233 AC073346.2-201ENST00000624724 2058 ntBASIC2.53□□□□□ -2.01
CD74P04233 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CD74P04233 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CD74P04233 MTND5P1-201ENST00000445440 1375 ntBASIC2.52□□□□□ -2.01
CD74P04233 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.52□□□□□ -2.01
CD74P04233 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 RNU1-35P-201ENST00000362782 153 ntBASIC2.52□□□□□ -2.01
CD74P04233 RNU5D-1-201ENST00000363299 116 ntBASIC2.52□□□□□ -2.01
CD74P04233 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.52□□□□□ -2.01
CD74P04233 SNORA7.4-201ENST00000384249 137 ntBASIC2.52□□□□□ -2.01
CD74P04233 SNORD15B-201ENST00000384714 146 ntBASIC2.52□□□□□ -2.01
CD74P04233 RPS4XP3-201ENST00000398541 413 ntBASIC2.52□□□□□ -2.01
CD74P04233 MTND4P13-201ENST00000402078 1023 ntBASIC2.52□□□□□ -2.01
CD74P04233 BX323014.1-201ENST00000412876 237 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.52□□□□□ -2.01
CD74P04233 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.52□□□□□ -2.01
CD74P04233 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.52□□□□□ -2.01
CD74P04233 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 C1DP1-201ENST00000426049 402 ntBASIC2.52□□□□□ -2.01
CD74P04233 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.52□□□□□ -2.01
CD74P04233 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CD74P04233 RPL23AP31-201ENST00000456160 467 ntBASIC2.52□□□□□ -2.01
CD74P04233 RNA5SP310-201ENST00000459084 116 ntBASIC2.52□□□□□ -2.01
CD74P04233 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
CD74P04233 AL358832.1-201ENST00000497800 389 ntBASIC2.52□□□□□ -2.01
CD74P04233 CAB39P1-201ENST00000502277 460 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC074250.1-201ENST00000511117 192 ntBASIC2.52□□□□□ -2.01
CD74P04233 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.52□□□□□ -2.01
CD74P04233 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.52□□□□□ -2.01
CD74P04233 MTCO3P15-201ENST00000526563 574 ntBASIC2.52□□□□□ -2.01
CD74P04233 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.52□□□□□ -2.01
CD74P04233 NDUFS5P6-201ENST00000529136 295 ntBASIC2.52□□□□□ -2.01
CD74P04233 AP001317.1-201ENST00000531194 960 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.52□□□□□ -2.01
CD74P04233 HSPE1P20-201ENST00000538133 289 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.52□□□□□ -2.01
CD74P04233 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.52□□□□□ -2.01
CD74P04233 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.52□□□□□ -2.01
CD74P04233 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CD74P04233 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.52□□□□□ -2.01
CD74P04233 ELOCP35-201ENST00000604289 336 ntBASIC2.52□□□□□ -2.01
CD74P04233 AC092954.1-201ENST00000609121 445 ntBASIC2.52□□□□□ -2.01
CD74P04233 RNU6-1192P-201ENST00000612197 107 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms