Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-903P-201ENST00000391270 109 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RN7SKP267-201ENST00000410381 285 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL451139.1-201ENST00000434718 346 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 GTF2IP13-201ENST00000438487 386 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AL353691.1-201ENST00000451332 387 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL162395.1-201ENST00000457882 422 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RNU6-333P-201ENST00000459117 107 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RN7SL517P-201ENST00000462240 305 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC092436.1-201ENST00000506450 503 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC005741.1-201ENST00000511094 432 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCD1O75127 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 RNU6-559P-201ENST00000516151 98 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 RNA5SP503-201ENST00000517047 117 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 Y_RNA.719-201ENST00000517156 106 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 Y_RNA.720-201ENST00000517166 92 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCD1O75127 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 AC040958.1-201ENST00000561102 201 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 FRG2DP-202ENST00000566967 323 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.08□□□□□ -1.44
PTCD1O75127 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.08□□□□□ -1.44
PTCD1O75127 SOCS5P3-201ENST00000425115 1576 ntBASIC6.08□□□□□ -1.44
PTCD1O75127 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PTCD1O75127 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC025031.4-201ENST00000621248 3271 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 RNA5SP515-201ENST00000364570 118 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PTCD1O75127 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 RPS15AP40-201ENST00000419621 391 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 MTCO2P27-201ENST00000420740 428 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AC092162.1-201ENST00000432828 434 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC104136.1-201ENST00000512969 394 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AC026402.1-201ENST00000513642 170 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 RNU2-10P-201ENST00000516375 211 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AP005435.4-201ENST00000529514 284 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
PTCD1O75127 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC006270.2-201ENST00000578523 652 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
PTCD1O75127 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCD1O75127 AP001330.4-201ENST00000604350 154 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 AC113194.1-201ENST00000606037 500 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AL627309.6-201ENST00000606857 840 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 AL022345.1-201ENST00000607292 135 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 MIR6716-201ENST00000613413 80 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 MTCO1P7-201ENST00000419523 1542 ntBASIC6.07□□□□□ -1.44
PTCD1O75127 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
PTCD1O75127 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCD1O75127 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
PTCD1O75127 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 AL121839.2-201ENST00000565058 6943 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PTCD1O75127 AC097461.1-201ENST00000568928 2821 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC009229.4-201ENST00000623854 1947 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCD1O75127 RNU6-639P-201ENST00000384074 107 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RNU6-1029P-201ENST00000384109 107 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RNU6-308P-201ENST00000390957 107 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RPL21P67-201ENST00000402896 478 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC079809.1-201ENST00000415468 276 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 RPL7AP25-201ENST00000423357 805 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCD1O75127 AL731563.1-201ENST00000442202 214 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 H2AFZP5-201ENST00000446960 382 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCD1O75127 SNORD121B-201ENST00000458838 81 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCD1O75127 RPL36AP41-201ENST00000493820 306 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 FAM206BP-201ENST00000510179 541 ntBASIC6.06□□□□□ -1.44
PTCD1O75127 AC007016.1-201ENST00000512110 244 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms