Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.73□□□□□ -1.97
SHOX2O60902 VN1R78P-201ENST00000597393 564 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 MIR1264-201ENST00000616374 69 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SHOX2O60902 AC073569.3-201ENST00000619055 682 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AC006111.3-201ENST00000622137 383 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.73□□□□□ -1.97
SHOX2O60902 MIR7843-201ENST00000622274 79 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 ZNF807-201ENST00000328088 1707 ntBASIC2.73□□□□□ -1.97
SHOX2O60902 AL136520.1-201ENST00000600311 1322 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHOX2O60902 RNU6-883P-201ENST00000384597 107 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 RN7SKP220-201ENST00000410611 288 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 AL024507.1-201ENST00000412741 274 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 MTATP6P4-201ENST00000427725 675 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.72□□□□□ -1.97
SHOX2O60902 AC006028.1-201ENST00000438379 402 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHOX2O60902 FDX1P2-201ENST00000450769 375 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 S100A11P2-201ENST00000467589 312 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC104472.2-201ENST00000469035 601 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.72□□□□□ -1.97
SHOX2O60902 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.72□□□□□ -1.97
SHOX2O60902 AL391156.1-201ENST00000554965 554 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC096644.4-201ENST00000563417 2912 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.72□□□□□ -1.97
SHOX2O60902 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 AL360181.4-201ENST00000621752 134 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SHOX2O60902 MTND5P31-201ENST00000419366 1374 ntBASIC2.72□□□□□ -1.97
SHOX2O60902 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.72□□□□□ -1.97
SHOX2O60902 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SHOX2O60902 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHOX2O60902 RNU6-1249P-201ENST00000363237 111 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 MIR525-201ENST00000384978 85 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 RNU6-821P-201ENST00000390995 107 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
SHOX2O60902 RPLP0P7-201ENST00000416050 667 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 PAICSP7-201ENST00000419829 962 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 CR848007.2-201ENST00000424918 787 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.71□□□□□ -1.98
SHOX2O60902 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 RN7SL504P-201ENST00000494496 287 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 OR2A20P-203ENST00000498397 1268 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
SHOX2O60902 AC117522.3-201ENST00000507974 584 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.71□□□□□ -1.98
SHOX2O60902 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.71□□□□□ -1.98
SHOX2O60902 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.71□□□□□ -1.98
SHOX2O60902 AC074051.3-201ENST00000570238 358 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 RPL23AP78-201ENST00000599928 470 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC025588.3-201ENST00000604182 274 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC009220.3-201ENST00000604318 586 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC008962.1-201ENST00000605729 304 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC090116.1-201ENST00000615679 446 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC009159.1-201ENST00000618386 642 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AC091046.2-201ENST00000620775 665 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.71□□□□□ -1.98
SHOX2O60902 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
SHOX2O60902 AC025263.3-201ENST00000622965 1396 ntBASIC2.71□□□□□ -1.98
SHOX2O60902 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.71□□□□□ -1.98
SHOX2O60902 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SHOX2O60902 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHOX2O60902 AP002907.1-201ENST00000606361 1430 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 SNORA14A-201ENST00000364773 135 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 MIR504-201ENST00000385065 83 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHOX2O60902 RNU4-47P-201ENST00000410876 114 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.7□□□□□ -1.98
SHOX2O60902 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.7□□□□□ -1.98
SHOX2O60902 AC011825.1-201ENST00000484967 388 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 AC111000.2-201ENST00000507775 550 ntBASIC2.7□□□□□ -1.98
SHOX2O60902 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms