Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.03□□□□□ -2.08
CACNA1AO00555 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.03□□□□□ -2.08
CACNA1AO00555 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CACNA1AO00555 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CACNA1AO00555 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CACNA1AO00555 SETP8-201ENST00000435341 628 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AL138799.3-201ENST00000438968 350 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1AO00555 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.02□□□□□ -2.09
CACNA1AO00555 AL356266.1-201ENST00000623311 483 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AC093591.3-201ENST00000634516 308 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CACNA1AO00555 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CACNA1AO00555 RPL27AP8-201ENST00000424277 446 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AC012182.1-201ENST00000570133 895 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AL020991.1-201ENST00000612314 373 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 AL139811.1-201ENST00000424779 2299 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.02□□□□□ -2.09
CACNA1AO00555 MIR96-201ENST00000362288 78 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1AO00555 AL136133.1-201ENST00000413694 376 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 VN1R31P-201ENST00000417498 730 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 AC234782.4-201ENST00000417646 1048 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 HMGB1P31-201ENST00000437242 427 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 MRPL50P4-201ENST00000446432 475 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 RN7SL75P-201ENST00000461926 281 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 LINC00888-204ENST00000487386 421 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 AC034222.1-201ENST00000494052 532 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1AO00555 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1AO00555 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1AO00555 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1AO00555 COX6CP2-201ENST00000444980 225 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1AO00555 AP004217.1-201ENST00000480579 346 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1AO00555 AC123904.3-201ENST00000547218 814 ntBASIC2.01□□□□□ -2.09
CACNA1AO00555 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.01□□□□□ -2.09
CACNA1AO00555 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.01□□□□□ -2.09
CACNA1AO00555 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CACNA1AO00555 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
CACNA1AO00555 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2□□□□□ -2.09
CACNA1AO00555 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
CACNA1AO00555 IFNWP4-201ENST00000453148 294 ntBASIC2□□□□□ -2.09
CACNA1AO00555 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2□□□□□ -2.09
CACNA1AO00555 AC034244.1-201ENST00000507687 207 ntBASIC2□□□□□ -2.09
CACNA1AO00555 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2□□□□□ -2.09
CACNA1AO00555 AC025281.1-201ENST00000567026 265 ntBASIC2□□□□□ -2.09
CACNA1AO00555 AC006023.2-201ENST00000609916 167 ntBASIC2□□□□□ -2.09
CACNA1AO00555 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CACNA1AO00555 AC020633.1-201ENST00000468439 2247 ntBASIC2□□□□□ -2.09
CACNA1AO00555 HMGB1P5-201ENST00000255320 642 ntBASIC2□□□□□ -2.09
CACNA1AO00555 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2□□□□□ -2.09
CACNA1AO00555 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2□□□□□ -2.09
CACNA1AO00555 Z99497.1-201ENST00000421282 135 ntBASIC2□□□□□ -2.09
CACNA1AO00555 MTND2P9-201ENST00000422293 931 ntBASIC2□□□□□ -2.09
CACNA1AO00555 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2□□□□□ -2.09
CACNA1AO00555 AC006390.1-201ENST00000508068 283 ntBASIC2□□□□□ -2.09
CACNA1AO00555 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2□□□□□ -2.09
CACNA1AO00555 AC084373.1-201ENST00000603311 235 ntBASIC2□□□□□ -2.09
CACNA1AO00555 AC244517.3-201ENST00000616254 1235 ntBASIC2□□□□□ -2.09
CACNA1AO00555 LINC00901.1-201ENST00000617252 152 ntBASIC2□□□□□ -2.09
CACNA1AO00555 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
CACNA1AO00555 Y_RNA.324-201ENST00000365165 102 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
CACNA1AO00555 AL355379.1-201ENST00000405542 640 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 OR6C64P-201ENST00000419708 825 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.99□□□□□ -2.09
CACNA1AO00555 AL353597.2-202ENST00000434901 373 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.99□□□□□ -2.09
CACNA1AO00555 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.99□□□□□ -2.09
CACNA1AO00555 HIGD1AP10-201ENST00000527837 282 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CACNA1AO00555 AL590095.2-201ENST00000604136 117 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AC013244.3-201ENST00000605614 388 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CACNA1AO00555 AC009812.4-201ENST00000569134 1805 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AL589743.1-201ENST00000551932 2712 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.99□□□□□ -2.09
CACNA1AO00555 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 RPS27P27-201ENST00000498779 255 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AC011352.3-201ENST00000505162 593 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC1.99□□□□□ -2.09
CACNA1AO00555 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CACNA1AO00555 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.99□□□□□ -2.09
CACNA1AO00555 OR4P1P-201ENST00000530808 1136 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.99□□□□□ -2.09
CACNA1AO00555 EEF1B2P4-201ENST00000551398 348 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.99□□□□□ -2.09
CACNA1AO00555 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CACNA1AO00555 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CACNA1AO00555 PHKBP1-201ENST00000450951 1951 ntBASIC1.99□□□□□ -2.09
CACNA1AO00555 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CACNA1AO00555 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CACNA1AO00555 MIR148B-201ENST00000362252 99 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms