Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.71□□□□□ -1.66
CBX4O00257 RPL7P23-201ENST00000493874 747 ntBASIC4.71□□□□□ -1.66
CBX4O00257 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.71□□□□□ -1.66
CBX4O00257 AC093278.1-201ENST00000494700 600 ntBASIC4.71□□□□□ -1.66
CBX4O00257 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.71□□□□□ -1.66
CBX4O00257 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.71□□□□□ -1.66
CBX4O00257 AC046134.1-201ENST00000514454 666 ntBASIC4.71□□□□□ -1.66
CBX4O00257 AC026801.2-201ENST00000515352 425 ntBASIC4.71□□□□□ -1.66
CBX4O00257 RNU4-60P-201ENST00000517239 135 ntBASIC4.71□□□□□ -1.66
CBX4O00257 DEFB108D-201ENST00000527787 222 ntBASIC4.71□□□□□ -1.66
CBX4O00257 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.71□□□□□ -1.66
CBX4O00257 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.71□□□□□ -1.66
CBX4O00257 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.71□□□□□ -1.66
CBX4O00257 OR4K8P-201ENST00000578842 1048 ntBASIC4.71□□□□□ -1.66
CBX4O00257 FRG1KP-201ENST00000623592 341 ntBASIC4.71□□□□□ -1.66
CBX4O00257 AL136313.1-201ENST00000624804 202 ntBASIC4.71□□□□□ -1.66
CBX4O00257 AC099654.5-201ENST00000636479 350 ntBASIC4.71□□□□□ -1.66
CBX4O00257 OR14L1P-202ENST00000641545 3009 ntBASIC4.71□□□□□ -1.66
CBX4O00257 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.71□□□□□ -1.66
CBX4O00257 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.71□□□□□ -1.66
CBX4O00257 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CBX4O00257 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CBX4O00257 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CBX4O00257 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.7□□□□□ -1.66
CBX4O00257 SALL4P2-201ENST00000423288 2910 ntBASIC4.7□□□□□ -1.66
CBX4O00257 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.7□□□□□ -1.66
CBX4O00257 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CBX4O00257 MTND5P3-201ENST00000438536 1800 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC021146.4-201ENST00000309229 279 ntBASIC4.7□□□□□ -1.66
CBX4O00257 OR52B1P-201ENST00000316506 909 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNU6-511P-201ENST00000363496 107 ntBASIC4.7□□□□□ -1.66
CBX4O00257 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CBX4O00257 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AL356776.1-201ENST00000406574 447 ntBASIC4.7□□□□□ -1.66
CBX4O00257 MIR1193-201ENST00000408109 78 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNU6-712P-201ENST00000410558 100 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RN7SKP159-201ENST00000410657 292 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNA5SP107-201ENST00000411358 122 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.7□□□□□ -1.66
CBX4O00257 ATP5JP1-201ENST00000431631 322 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC098614.3-201ENST00000438957 440 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 SNRPEP8-201ENST00000442866 260 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 AL162591.2-201ENST00000449634 317 ntBASIC4.7□□□□□ -1.66
CBX4O00257 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 AC008628.2-201ENST00000502605 298 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC108145.1-201ENST00000503770 153 ntBASIC4.7□□□□□ -1.66
CBX4O00257 HSPD1P15-201ENST00000505573 1122 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 AC114781.4-201ENST00000513707 639 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNU6-1095P-201ENST00000516148 108 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNU6-835P-201ENST00000516974 104 ntBASIC4.7□□□□□ -1.66
CBX4O00257 RNU6-64P-201ENST00000517119 105 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 PHBP17-201ENST00000528576 541 ntBASIC4.7□□□□□ -1.66
CBX4O00257 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.7□□□□□ -1.66
CBX4O00257 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 AC069061.3-201ENST00000582254 823 ntBASIC4.7□□□□□ -1.66
CBX4O00257 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.7□□□□□ -1.66
CBX4O00257 BNIP3P9-201ENST00000603714 553 ntBASIC4.7□□□□□ -1.66
CBX4O00257 AL031666.3-201ENST00000609320 1006 ntBASIC4.7□□□□□ -1.66
CBX4O00257 DISC2.1-201ENST00000612827 205 ntBASIC4.7□□□□□ -1.66
CBX4O00257 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.7□□□□□ -1.66
CBX4O00257 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 AC068724.3-201ENST00000625906 87 ntBASIC4.7□□□□□ -1.66
CBX4O00257 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
CBX4O00257 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CBX4O00257 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CBX4O00257 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.7□□□□□ -1.66
CBX4O00257 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.69□□□□□ -1.66
CBX4O00257 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CBX4O00257 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
CBX4O00257 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.69□□□□□ -1.66
CBX4O00257 BTBD10P1-201ENST00000549824 1352 ntBASIC4.69□□□□□ -1.66
CBX4O00257 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CBX4O00257 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CBX4O00257 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CBX4O00257 Y_RNA.367-201ENST00000365544 101 ntBASIC4.69□□□□□ -1.66
CBX4O00257 RNU4-48P-201ENST00000365559 182 ntBASIC4.69□□□□□ -1.66
CBX4O00257 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.69□□□□□ -1.66
CBX4O00257 RNU6-641P-201ENST00000384006 107 ntBASIC4.69□□□□□ -1.66
CBX4O00257 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.69□□□□□ -1.66
CBX4O00257 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CBX4O00257 AL136372.1-201ENST00000403060 228 ntBASIC4.69□□□□□ -1.66
CBX4O00257 OR51A5P-201ENST00000415429 942 ntBASIC4.69□□□□□ -1.66
CBX4O00257 MTCO3P12-201ENST00000416718 547 ntBASIC4.69□□□□□ -1.66
CBX4O00257 AL513185.2-201ENST00000425543 193 ntBASIC4.69□□□□□ -1.66
CBX4O00257 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
CBX4O00257 OR2AS1P-201ENST00000427827 319 ntBASIC4.69□□□□□ -1.66
CBX4O00257 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.69□□□□□ -1.66
CBX4O00257 AL138799.3-201ENST00000438968 350 ntBASIC4.69□□□□□ -1.66
CBX4O00257 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.69□□□□□ -1.66
CBX4O00257 TDGF1P1-201ENST00000445734 527 ntBASIC4.69□□□□□ -1.66
CBX4O00257 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms