Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 CKS1BP1-201ENST00000555221 240 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL449363.1-201ENST00000617815 186 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AP006248.3-201ENST00000623580 594 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 DDX10P1-201ENST00000448545 1933 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL390862.1-201ENST00000635467 1469 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 ZNF285B-201ENST00000561698 1767 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AP006437.1-201ENST00000641440 3685 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RNA5SP456-201ENST00000364002 114 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 SNORA5A-201ENST00000384111 134 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-31P-201ENST00000384388 108 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AL138827.1-201ENST00000402666 306 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 SUMO2P12-201ENST00000405924 140 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL17P12-201ENST00000413391 526 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 BRWD1P3-201ENST00000428816 390 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 EZH2P1-201ENST00000431167 291 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC093156.1-201ENST00000440382 670 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RPS3AP12-201ENST00000443616 753 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL37P4-201ENST00000448908 268 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL23AP7-203ENST00000449021 469 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 FPGT-203ENST00000467578 601 ntTSL 2 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU2-19P-201ENST00000517288 84 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC007954.1-201ENST00000554198 494 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 GTF2IP22-201ENST00000554443 182 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 MED28P6-201ENST00000558776 231 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC090751.1-201ENST00000566966 267 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 ATP1B3P1-201ENST00000605365 821 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AP004247.3-201ENST00000608682 624 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC004908.2-201ENST00000609090 574 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC005962.2-201ENST00000611427 652 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC004852.3-201ENST00000614131 326 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 ZYXP1-201ENST00000617638 118 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC015967.1-201ENST00000619893 476 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AL034408.1-202ENST00000636088 415 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR7515-201ENST00000637837 67 ntBASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.23□□□□□ -2.21
CHKB-CPT1BH3BT56 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC073346.2-201ENST00000624724 2058 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 SNORA51.1-201ENST00000363243 140 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 CYB5AP4-201ENST00000396692 399 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL26P29-201ENST00000415623 438 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 XKRYP1-201ENST00000423438 492 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC234781.2-201ENST00000426370 994 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AL513175.1-201ENST00000431492 780 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 XKRYP2-201ENST00000432915 492 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 TRIM60P9Y-201ENST00000438459 816 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AL714022.1-201ENST00000439897 151 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL21P133-201ENST00000443666 476 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 TRIM60P11Y-201ENST00000445313 801 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC116337.2-201ENST00000477662 156 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 NDUFA5P12-201ENST00000503796 343 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC022447.3-201ENST00000506865 495 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 SNORA31.25-201ENST00000517242 134 ntBASIC1.22□□□□□ -2.21
CHKB-CPT1BH3BT56 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms