Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC006020.1-201ENST00000420179 1854 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AL442639.1-201ENST00000625030 1899 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 Y_RNA.86-201ENST00000363020 111 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 Y_RNA.255-201ENST00000364581 97 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 SNORA23-201ENST00000365128 182 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RNU5E-6P-201ENST00000365574 115 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-629P-201ENST00000384061 103 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-606P-201ENST00000384721 111 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AL357515.1-201ENST00000402967 542 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RPEP3-201ENST00000425462 676 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 ZNF863P-201ENST00000426746 417 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC079780.1-201ENST00000428259 207 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC138761.5-201ENST00000433967 325 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AL359073.1-201ENST00000448036 403 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RPS20P20-201ENST00000460498 340 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RN7SL517P-201ENST00000462240 305 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RPL7AP28-201ENST00000464513 571 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC011276.1-201ENST00000469688 323 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC109327.1-201ENST00000471666 403 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RPS29P25-201ENST00000481709 171 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC078817.1-201ENST00000492623 435 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 SLC25A15P5-201ENST00000508033 253 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC135001.1-201ENST00000544546 283 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC007224.1-201ENST00000564410 144 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 MIR1254-2-201ENST00000579553 63 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 BNIP3P9-201ENST00000603714 553 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC010591.1-201ENST00000603941 649 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 BNIP3P10-201ENST00000605360 577 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RMST_3.1-201ENST00000611651 109 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC104260.1-201ENST00000616660 539 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 SNHG22-203ENST00000617833 660 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 AC093648.1-201ENST00000623546 606 ntBASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CCDC163A0A0D9SF12 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-451P-201ENST00000362921 107 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 MIR454-201ENST00000390180 115 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 TXNP7-201ENST00000406296 293 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 SNRPEP10-201ENST00000420249 274 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC244098.2-201ENST00000422068 99 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 CALM1P1-201ENST00000442082 433 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 MTCO3P45-201ENST00000443036 613 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AL356010.1-201ENST00000456364 102 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 RNU7-182P-201ENST00000459009 62 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AL163973.1-201ENST00000484753 577 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 NIPA2P2-201ENST00000496376 1083 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 PCBP2P3-201ENST00000509726 843 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC023141.12-201ENST00000512399 199 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 CENPUP1-201ENST00000526649 1202 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC023575.1-201ENST00000580510 358 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC004825.2-201ENST00000616634 455 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 AC110801.1-201ENST00000623590 212 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 THAP12P5-201ENST00000405864 2275 ntBASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC163A0A0D9SF12 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC163A0A0D9SF12 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms