Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MIR3117-201ENST00000584034 78 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 TPMTP1-201ENST00000592307 737 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 RPS15AP11-201ENST00000594193 385 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC079089.3-201ENST00000603094 673 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AL159169.3-201ENST00000608871 561 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AL137847.3-201ENST00000611521 109 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 UCA1.1-201ENST00000620952 75 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC027309.3-201ENST00000623419 351 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 CRYM-AS1-204ENST00000637983 556 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC009812.4-201ENST00000569134 1805 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 AC009902.3-201ENST00000606235 2172 ntBASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV13-1A0A0B4J241 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 SDAD1P2-201ENST00000441308 2028 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 TAB3P1-202ENST00000452645 1634 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL049780.3-201ENST00000624612 1583 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC104446.1-201ENST00000613728 1321 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU6-891P-201ENST00000384280 111 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RNA5SP354-201ENST00000391247 136 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU4-72P-201ENST00000410754 173 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 VTA1P1-201ENST00000414044 866 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 USP9YP20-201ENST00000419224 558 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 Z85994.2-201ENST00000434327 452 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 MRPS33P4-201ENST00000434892 317 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC011816.1-201ENST00000441346 546 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 MTND2P19-201ENST00000449129 1012 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 PNPLA4P1-201ENST00000458328 305 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC092798.1-201ENST00000458542 409 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU7-26P-201ENST00000458980 63 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC078857.1-201ENST00000469870 667 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC126182.1-201ENST00000478134 357 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL135752.1-201ENST00000479477 471 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC090543.1-201ENST00000492168 485 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 EIF4EP3-201ENST00000498782 656 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RNU6-202P-201ENST00000515998 96 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 GLYCAM1-201ENST00000546596 285 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC090888.1-201ENST00000561335 1141 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC009127.3-201ENST00000570531 403 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 YPEL5P2-201ENST00000605553 359 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 MIR6840-201ENST00000611937 71 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AC025588.4-201ENST00000615802 908 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.78□□□□□ -2.12
TRAV13-1A0A0B4J241 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
TRAV13-1A0A0B4J241 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 CR848007.1-201ENST00000442354 1699 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU1-140P-201ENST00000365040 165 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MIR142-201ENST00000384835 87 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MTND4LP20-201ENST00000402379 270 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AL162578.1-201ENST00000406202 378 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AL356967.1-201ENST00000406305 431 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 RNA5SP21-201ENST00000410917 96 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 USP9YP27-201ENST00000418455 438 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MTCO1P39-201ENST00000426148 480 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 RPS12P2-201ENST00000439728 269 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC104978.1-201ENST00000449387 391 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 RNU6-488P-201ENST00000515918 99 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORA70.16-201ENST00000516390 95 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 HMGB1P46-201ENST00000520062 610 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AP003102.1-201ENST00000525638 661 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 NDUFS5P6-201ENST00000529136 295 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 SNORD53-201ENST00000579969 78 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC125494.3-201ENST00000602759 455 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 MTCO3P22-201ENST00000603219 784 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 SRGNP1-201ENST00000603392 451 ntBASIC1.77□□□□□ -2.13
TRAV13-1A0A0B4J241 SUMO2P14-201ENST00000604488 293 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms