Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 HMGN2P27-201ENST00000427352 270 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 HMGB1P9-201ENST00000429856 646 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 ARL5AP4-201ENST00000430731 512 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AL133396.1-201ENST00000432048 687 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 EIF5AP4-201ENST00000441206 465 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AP000281.1-201ENST00000444036 316 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 SNORD127-201ENST00000458892 86 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AL122020.1-201ENST00000472287 459 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC007686.1-201ENST00000488511 463 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 LSM3P4-201ENST00000502948 309 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC083829.1-201ENST00000503756 657 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 ACA59.1-201ENST00000515966 143 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 SNORA31.3-201ENST00000516029 96 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP234-201ENST00000517173 224 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC126615.2-201ENST00000553003 515 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC007375.1-201ENST00000554513 578 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR4776-2-201ENST00000580204 80 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR5188-201ENST00000583467 113 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR6889-201ENST00000613185 59 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC022400.9-201ENST00000623633 273 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC010615.1-201ENST00000594254 1764 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AC233263.6-201ENST00000631132 1963 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 BCORP1-203ENST00000513194 5093 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-472P-201ENST00000384299 107 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 Y_RNA.551-201ENST00000384661 102 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL445529.1-201ENST00000398713 389 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 THAP12P5-201ENST00000405864 2275 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL138885.1-201ENST00000405921 675 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU2-64P-201ENST00000411315 191 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL158071.1-201ENST00000430315 461 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 RPS3AP12-201ENST00000443616 753 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 PRDX3P3-201ENST00000447765 522 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL37P6-202ENST00000464216 403 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC022447.4-201ENST00000504053 364 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP40-201ENST00000517211 242 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC005183.1-201ENST00000603687 1979 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL160281.1-201ENST00000605307 311 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AC005344.1-201ENST00000613391 459 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 AL031601.2-202ENST00000622650 282 ntBASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PCDHGA11Q9Y5H2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AL731566.1-201ENST00000620490 1937 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 AC032011.1-201ENST00000611703 1549 ntBASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms