Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA3Q9Y5H0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL645937.1-201ENST00000641739 1652 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-1120P-201ENST00000362988 108 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-335P-201ENST00000364563 113 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU4-12P-201ENST00000365233 139 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-169P-201ENST00000365336 107 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-456P-201ENST00000384493 107 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU4-25P-201ENST00000410569 230 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RPEP3-201ENST00000425462 676 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC016696.1-201ENST00000446949 318 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 HMGB3P30-201ENST00000457863 606 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 SCARNA10-201ENST00000459255 330 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RPS3AP14-201ENST00000483907 780 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC019235.1-201ENST00000503847 207 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-410P-201ENST00000517006 107 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-709P-201ENST00000517257 104 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC100870.1-201ENST00000522035 505 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AP004371.1-201ENST00000525240 214 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 MTCYBP41-201ENST00000528913 1123 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC128657.1-201ENST00000549459 145 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL157687.1-201ENST00000554853 619 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 SUB1P2-201ENST00000556401 297 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL359212.1-201ENST00000556608 614 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC105224.1-201ENST00000587055 421 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 HMGN2P28-201ENST00000606102 262 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC140113.4-201ENST00000622087 222 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AL157786.1-207ENST00000627771 695 ntBASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA3Q9Y5H0 AC015813.6-201ENST00000624409 5808 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL445487.1-201ENST00000415694 1580 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC107068.1-201ENST00000563286 4218 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 HSPE1P11-201ENST00000339579 310 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 RN7SKP227-201ENST00000364445 330 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6-1181P-201ENST00000384191 106 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 MIR135A2-201ENST00000384854 100 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC069157.1-201ENST00000421749 137 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 MTND2P24-201ENST00000453434 806 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC007967.1-201ENST00000455422 1159 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC013267.1-201ENST00000458227 267 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 SNORD97-201ENST00000459187 142 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC015795.1-201ENST00000513669 327 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 CCNG2P1-201ENST00000549521 1000 ntBASIC4.48□□□□□ -1.69
PCDHGA3Q9Y5H0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms