Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 AP1S2P1-201ENST00000457344 379 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 RPL21P11-201ENST00000461458 483 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 RPL31P61-201ENST00000496160 376 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 NDUFB4P2-201ENST00000509515 391 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 RNA5SP179-201ENST00000517284 121 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 EIF1P4-201ENST00000572664 335 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP3Q9Y446 MIR4697-201ENST00000582977 78 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC004492.1-201ENST00000607036 742 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 ZYXP1-201ENST00000617638 118 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 AC018755.4-201ENST00000619715 454 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
PKP3Q9Y446 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PKP3Q9Y446 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PKP3Q9Y446 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PKP3Q9Y446 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
PKP3Q9Y446 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.77
PKP3Q9Y446 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 Y_RNA.3-201ENST00000362331 103 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 Y_RNA.46-201ENST00000362695 102 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 U3.15-201ENST00000365398 212 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RNU6-359P-201ENST00000365466 108 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RNU6-1215P-201ENST00000384441 102 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC136624.1-201ENST00000400791 413 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RPL7P25-201ENST00000404151 721 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 FCF1P10-201ENST00000407590 479 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RNA5SP239-201ENST00000410218 129 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AF274854.1-201ENST00000413236 615 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 HMGB3P23-201ENST00000414981 585 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 SPA17P1-201ENST00000416656 452 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC010975.2-201ENST00000427781 588 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC108734.1-201ENST00000439549 399 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL353691.1-201ENST00000451332 387 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 snoU109.4-201ENST00000458953 143 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RPL23AP2-201ENST00000471227 466 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC021382.1-201ENST00000483523 359 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC096751.1-202ENST00000502691 1067 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AP003467.2-201ENST00000520175 319 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 OR4R3P-201ENST00000525084 838 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 RPL21P5-201ENST00000554662 472 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AL139286.1-201ENST00000604465 483 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC091167.4-201ENST00000605079 184 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 OR10AB1P-201ENST00000609613 938 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC103858.2-201ENST00000621471 543 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC099654.13-201ENST00000639774 207 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 FAM91A3P-201ENST00000456826 2544 ntBASIC3.96□□□□□ -1.78
PKP3Q9Y446 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PKP3Q9Y446 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
PKP3Q9Y446 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PKP3Q9Y446 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PKP3Q9Y446 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 FRG1BP-201ENST00000278882 761 ntBASIC3.95□□□□□ -1.78
PKP3Q9Y446 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 RNU6-628P-201ENST00000410675 107 ntBASIC3.95□□□□□ -1.78
PKP3Q9Y446 RNU4-78P-201ENST00000410940 126 ntBASIC3.95□□□□□ -1.78
PKP3Q9Y446 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.95□□□□□ -1.78
PKP3Q9Y446 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms