Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 COX6CP15-201ENST00000426313 211 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 RPL37P21-201ENST00000435890 276 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 Z74696.2-201ENST00000436514 498 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 DNAJC19P4-201ENST00000440115 345 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 BX276092.4-201ENST00000452056 248 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 BX322784.1-201ENST00000455793 1077 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 BTF3P5-201ENST00000457252 467 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 SNORD42A-201ENST00000459584 64 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC010618.1-201ENST00000469924 477 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC021678.1-201ENST00000505195 936 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 POU5F1P7-201ENST00000508759 541 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 RN7SKP209-201ENST00000516888 304 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC025881.1-201ENST00000518851 512 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 MRPL49P2-201ENST00000521066 465 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC068587.4-201ENST00000533893 186 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 LSM6P2-201ENST00000552208 177 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 ZNF192P1-203ENST00000565888 810 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 MIR3939-201ENST00000582614 106 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC005771.1-201ENST00000585581 349 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 ARF4P1-201ENST00000605447 541 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC013476.2-201ENST00000614456 459 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC095031.1-201ENST00000623685 672 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AC048347.1-201ENST00000624621 427 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 CRYM-AS1-204ENST00000637983 556 ntBASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
MRPS28Q9Y2Q9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 MTCO1P24-201ENST00000515438 1558 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RNU5E-5P-201ENST00000365379 116 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 Y_RNA.516-201ENST00000384541 124 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AC025750.1-201ENST00000399891 379 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 MIR1305-201ENST00000408300 86 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AC109780.2-201ENST00000413467 845 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RPL21P32-201ENST00000419877 477 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 RPL21P109-201ENST00000422213 475 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL513174.1-201ENST00000423182 629 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL356583.2-201ENST00000426536 280 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL691449.1-201ENST00000426570 421 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 SKP1P1-201ENST00000438081 489 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 PGBD4P3-201ENST00000440731 581 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL831737.1-201ENST00000441288 271 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 CDC27P1-201ENST00000445384 715 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 NPM1P49-201ENST00000448027 714 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 NUTF2P3-201ENST00000448540 384 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 AC084198.1-201ENST00000477747 402 ntBASIC3.3□□□□□ -1.88
MRPS28Q9Y2Q9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms