Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 TRAV37-201ENST00000553906 342 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 MTCO3P24-201ENST00000572729 782 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 MTND3P13-201ENST00000574391 343 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AC245036.5-201ENST00000596330 847 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 BDH2P1-201ENST00000602288 736 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AL109653.1-201ENST00000603091 248 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AC084824.4-201ENST00000620106 731 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AL049777.1-201ENST00000622740 518 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AC120349.2-201ENST00000625002 298 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 AC099654.8-201ENST00000637757 681 ntBASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.02□□□□□ -1.93
NPIPA1Q9UND3 SRP72P2-201ENST00000344851 1979 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 MAPK10-322ENST00000641485 4530 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC109315.1-201ENST00000584143 1347 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC058791.1-201ENST00000608412 3198 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 Y_RNA.111-201ENST00000363248 100 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 RNU6-216P-201ENST00000363282 104 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC019178.2-201ENST00000423595 505 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 MTCO1P39-201ENST00000426148 480 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 HMGN2P20-201ENST00000437531 273 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 HMGB3P6-201ENST00000444896 598 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 Z82190.1-201ENST00000454534 490 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC010468.1-201ENST00000461022 817 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AP001992.1-205ENST00000462248 379 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 RPS15AP17-201ENST00000470598 390 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 COX7A2P2-201ENST00000505291 250 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 MIR2276-201ENST00000516886 89 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC004024.1-201ENST00000549244 247 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC106900.2-201ENST00000604994 317 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AL158050.2-201ENST00000605336 568 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC106028.5-201ENST00000610332 395 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC135507.2-201ENST00000612443 309 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AL353748.2-201ENST00000622148 471 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AC010872.1-201ENST00000624225 675 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 MIR1322-201ENST00000638013 71 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 AP002907.1-201ENST00000606361 1430 ntBASIC3.01□□□□□ -1.93
NPIPA1Q9UND3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPA1Q9UND3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPA1Q9UND3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA1Q9UND3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NPIPA1Q9UND3 RNU1-75P-201ENST00000347264 129 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 SNORD116-12-201ENST00000384468 92 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3□□□□□ -1.93
NPIPA1Q9UND3 BX679664.1-201ENST00000434429 253 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 MUPP-201ENST00000438111 566 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC026410.2-201ENST00000460281 156 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 RPS3AP43-201ENST00000479743 781 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC021205.2-201ENST00000480069 347 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC023424.2-201ENST00000493479 777 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC096571.1-202ENST00000506634 735 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 RNA5SP341-201ENST00000516261 117 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 RN7SKP31-201ENST00000516354 278 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 HIGD1AP1-201ENST00000550979 275 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 MIR5004-201ENST00000579078 107 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 VN1R83P-201ENST00000595685 445 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 BNIP3P27-201ENST00000599991 412 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AL022099.1-201ENST00000604551 712 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 AF129408.1-201ENST00000608767 431 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 PART1_2.1-201ENST00000612397 250 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC024257.5-201ENST00000612739 531 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC008121.2-201ENST00000614647 523 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC068831.7-201ENST00000616954 363 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3□□□□□ -1.93
NPIPA1Q9UND3 SNORD39.4-201ENST00000620099 78 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AC004009.2-201ENST00000623016 728 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 AL356585.4-201ENST00000623078 1229 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 SCARNA15.3-201ENST00000626315 122 ntBASIC3□□□□□ -1.93
NPIPA1Q9UND3 SCARNA4.1-201ENST00000628597 123 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms