Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SNORD116-26-201ENST00000516006 96 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-1092P-201ENST00000516955 87 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 HMGB1P19-201ENST00000517578 577 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC007151.1-201ENST00000572774 483 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 MIR4270-201ENST00000581799 70 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AL020997.2-201ENST00000602607 184 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AL390240.1-201ENST00000612950 384 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC025034.2-201ENST00000623264 286 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 U6.114-201ENST00000636407 96 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC244517.1-201ENST00000606030 2086 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC010300.1-201ENST00000600671 5134 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 A2MP1-204ENST00000566278 4130 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 AC006206.1-201ENST00000544842 3387 ntBASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.37□□□□□ -1.71
CDC42EP3Q9UKI2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 EXOC5P1-201ENST00000510543 1969 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-989P-201ENST00000362756 107 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 MIR600-201ENST00000385007 98 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AL592114.1-201ENST00000403842 483 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RNA5SP56-201ENST00000410277 118 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 BEND7P1-201ENST00000422058 457 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RPL12P46-201ENST00000436610 195 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 PRPF38AP2-201ENST00000438179 851 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC097484.1-201ENST00000471148 389 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RN7SL459P-201ENST00000481078 302 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC005741.1-201ENST00000511094 432 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 HIGD1AP3-201ENST00000515857 278 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-559P-201ENST00000516151 98 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC022790.1-201ENST00000522872 204 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC122688.1-201ENST00000541494 223 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 MIR3942-201ENST00000585264 109 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 MIR4496-201ENST00000635896 61 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AL596275.2-204ENST00000641628 552 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AL596275.2-206ENST00000641957 626 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 AP001350.1-201ENST00000601906 1524 ntBASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDC42EP3Q9UKI2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 AC000374.1-201ENST00000434698 1745 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 Y_RNA.212-201ENST00000364177 102 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNU6-188P-201ENST00000364207 107 ntBASIC4.35□□□□□ -1.71
CDC42EP3Q9UKI2 RNVU1-6-201ENST00000364688 164 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms