Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 SNORD84-203ENST00000584275 78 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL590099.1-201ENST00000615276 138 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL353748.2-201ENST00000622148 471 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 MTND4P16-201ENST00000466108 1367 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RNU6-97P-201ENST00000363387 104 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RNY3P9-201ENST00000384727 106 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AL356421.1-201ENST00000403255 413 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RPL17P36-201ENST00000420302 549 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RPL21P66-201ENST00000426566 466 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 BX679664.1-201ENST00000434429 253 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AP000542.1-201ENST00000448473 371 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC096751.1-202ENST00000502691 1067 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RPF2P2-201ENST00000504693 896 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC017037.2-201ENST00000513850 890 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC119751.5-201ENST00000514077 770 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 SNORA70.14-201ENST00000516205 110 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RN7SKP244-201ENST00000516513 307 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 OSBPL9P5-201ENST00000542581 171 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 PARP1P2-201ENST00000556806 195 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC092354.2-201ENST00000607786 514 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC097468.3-201ENST00000607956 456 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC122133.1-201ENST00000613964 233 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AC110801.1-201ENST00000623590 212 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 CU459211.1-201ENST00000635667 749 ntBASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMA1Q9UHB6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 SNORA70.2-201ENST00000364506 135 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RNU6-359P-201ENST00000365466 108 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RPL32P23-201ENST00000397237 405 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RPS3AP26-201ENST00000398259 784 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RN7SKP156-201ENST00000410308 342 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 MTCO1P17-201ENST00000411522 491 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 OR1AA1P-201ENST00000419597 916 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC079780.1-201ENST00000428259 207 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL445567.1-201ENST00000439121 144 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL831737.1-201ENST00000441288 271 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC091564.1-201ENST00000464563 479 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RPL30P9-201ENST00000465586 330 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 RN7SL385P-201ENST00000468873 276 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC023598.1-201ENST00000472521 361 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC112198.1-201ENST00000505369 1220 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC022447.3-201ENST00000506865 495 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC111000.2-201ENST00000507775 550 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 SNORA70.19-201ENST00000516717 90 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AP004247.1-201ENST00000531556 1289 ntBASIC3.86□□□□□ -1.79
LIMA1Q9UHB6 AC013828.2-201ENST00000532487 235 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms