Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL161781.1-201ENST00000354277 403 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNU4-44P-201ENST00000363050 141 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNU6-1097P-201ENST00000363586 107 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNA5SP366-201ENST00000365454 123 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 SNORA70.4-201ENST00000365509 134 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNU6-510P-201ENST00000391239 108 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AL356421.1-201ENST00000403255 413 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AL592291.1-201ENST00000403830 352 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 TXNP7-201ENST00000406296 293 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNA5SP44-201ENST00000410446 133 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNU6-1148P-201ENST00000410992 104 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 CTSL3P-202ENST00000412179 788 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AL132765.1-201ENST00000434165 553 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC000374.1-201ENST00000434698 1745 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 MTND6P18-201ENST00000439477 513 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 RNU7-63P-201ENST00000459054 62 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC110792.2-201ENST00000510278 224 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AP005597.4-201ENST00000526762 229 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 OR4R1P-201ENST00000529879 463 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC087241.2-201ENST00000535801 324 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 PSMA3P-201ENST00000555485 635 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC005668.1-201ENST00000571142 476 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC006272.2-201ENST00000594725 163 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC105429.2-201ENST00000610567 517 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC093913.1-201ENST00000614178 329 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 AC092447.10-201ENST00000620607 1652 ntBASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 MTND5P28-201ENST00000438005 1594 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 SPRR2C-201ENST00000290702 219 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 SDHCP2-201ENST00000398565 501 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 Z98745.1-201ENST00000402553 494 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 PPIAP31-201ENST00000405422 495 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AL080315.1-201ENST00000406055 466 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 MTND3P8-201ENST00000412909 339 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 RPL23AP93-201ENST00000440847 484 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 RN7SL542P-201ENST00000467147 294 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AP000893.1-201ENST00000474462 794 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 EIF4EP3-201ENST00000498782 656 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 RN7SKP116-201ENST00000516902 319 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC023632.4-201ENST00000517783 191 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 SUB1P1-201ENST00000524415 382 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 HNRNPCP4-201ENST00000571636 900 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC098848.2-201ENST00000588023 330 ntBASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDLIM7Q9NR12 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.09□□□□□ -1.6
PDLIM7Q9NR12 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
PDLIM7Q9NR12 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PDLIM7Q9NR12 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
PDLIM7Q9NR12 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AL391684.1-202ENST00000641293 1636 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 MTND4P35-201ENST00000604257 1375 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AL049555.1-201ENST00000562834 1933 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 RNU6-28P-201ENST00000362378 107 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 Y_RNA.184-201ENST00000363884 108 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC019155.1-201ENST00000382242 574 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms