Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC108078.2-201ENST00000510750 236 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 MTCO3P44-201ENST00000510977 541 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC090115.3-201ENST00000553218 849 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 MTCO3P23-201ENST00000561363 289 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 CYCSP40-201ENST00000575927 294 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 MIR744-201ENST00000578242 98 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC110743.1-201ENST00000584870 478 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC123786.2-201ENST00000603459 275 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC104695.3-201ENST00000604052 296 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC000068.2-201ENST00000608816 460 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 AC103710.2-202ENST00000641454 2853 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SSU72Q9NP77 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.59
SSU72Q9NP77 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SSU72Q9NP77 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSU72Q9NP77 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSU72Q9NP77 OR52B3P-201ENST00000314715 928 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 SNORD3E-201ENST00000362899 217 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 U3.3-201ENST00000362986 216 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 Y_RNA.176-201ENST00000363815 109 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 RN7SKP171-201ENST00000364417 303 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 RNU6-593P-201ENST00000364716 112 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 SNORA2.3-201ENST00000383920 135 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 MIR105-1-201ENST00000385222 81 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 RPS29P10-201ENST00000439197 166 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 RPL21P8-201ENST00000465083 535 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 AC026782.1-201ENST00000512952 449 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 RNU6-1016P-201ENST00000516689 94 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AC012400.1-201ENST00000518452 381 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 TRIM77BP-201ENST00000524985 1119 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 HMGB1P40-201ENST00000525121 540 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AP000676.2-201ENST00000529711 301 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 ATP1B3P1-201ENST00000605365 821 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AC006157.1-201ENST00000611750 366 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 AL591926.1-201ENST00000620542 217 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 MIR6806-201ENST00000622141 64 ntBASIC5.09□□□□□ -1.59
SSU72Q9NP77 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSU72Q9NP77 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSU72Q9NP77 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SSU72Q9NP77 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSU72Q9NP77 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSU72Q9NP77 ZNF33CP-201ENST00000432492 2030 ntBASIC5.09□□□□□ -1.6
SSU72Q9NP77 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SSU72Q9NP77 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.09□□□□□ -1.6
SSU72Q9NP77 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.09□□□□□ -1.6
SSU72Q9NP77 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSU72Q9NP77 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSU72Q9NP77 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSU72Q9NP77 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSU72Q9NP77 AL391417.1-201ENST00000404100 426 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 RNU4-25P-201ENST00000410569 230 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 OR2AT2P-201ENST00000413438 905 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 AL669831.1-202ENST00000428504 417 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC096644.2-201ENST00000429278 159 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 EEF1B2P3-201ENST00000447718 678 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 GSTA11P-201ENST00000452866 669 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 CECR9-201ENST00000453421 199 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 SNORD97-201ENST00000459187 142 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC053481.1-201ENST00000467217 306 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC044810.1-201ENST00000480271 711 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.08□□□□□ -1.6
SSU72Q9NP77 RFPL4AP5-201ENST00000514977 504 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 Y_RNA.670-201ENST00000516255 105 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AP000859.1-201ENST00000525536 307 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 DEFB108D-201ENST00000527787 222 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC063949.1-201ENST00000552900 865 ntBASIC5.08□□□□□ -1.6
SSU72Q9NP77 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms