Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR2053-201ENST00000459295 91 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.89□□□□□ -1.47
CALR3Q96L12 RPL23AP2-201ENST00000471227 466 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.89□□□□□ -1.47
CALR3Q96L12 RPL31P60-201ENST00000478450 367 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 AC058823.1-201ENST00000485315 474 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.89□□□□□ -1.47
CALR3Q96L12 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CALR3Q96L12 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.89□□□□□ -1.47
CALR3Q96L12 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 DNAJC8P1-201ENST00000554535 372 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 AL355836.1-201ENST00000555951 870 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.89□□□□□ -1.47
CALR3Q96L12 OR1E3-201ENST00000575608 948 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.89□□□□□ -1.47
CALR3Q96L12 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CALR3Q96L12 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CALR3Q96L12 AL078596.1-201ENST00000624856 447 ntBASIC5.89□□□□□ -1.47
CALR3Q96L12 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.89□□□□□ -1.47
CALR3Q96L12 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.89□□□□□ -1.47
CALR3Q96L12 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CALR3Q96L12 AC104964.3-201ENST00000606115 2860 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CALR3Q96L12 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CALR3Q96L12 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.88□□□□□ -1.47
CALR3Q96L12 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CALR3Q96L12 SNORA75B-201ENST00000384053 137 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 Y_RNA.480-201ENST00000384364 102 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 PPIAP9-201ENST00000403866 498 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.88□□□□□ -1.47
CALR3Q96L12 AL590632.1-201ENST00000424289 371 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 RPL7P37-201ENST00000425095 738 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 MTCO1P39-201ENST00000426148 480 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.88□□□□□ -1.47
CALR3Q96L12 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.88□□□□□ -1.47
CALR3Q96L12 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 RPL21P41-201ENST00000459863 264 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 Y_RNA.708-201ENST00000516950 96 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.88□□□□□ -1.47
CALR3Q96L12 AC026371.1-201ENST00000551867 419 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 RPL23AP87-202ENST00000573039 466 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 MIR5692A1-201ENST00000580523 69 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 AC233702.9-201ENST00000581528 203 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 MIR4472-2-201ENST00000582069 67 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.88□□□□□ -1.47
CALR3Q96L12 PRPF19P1-201ENST00000584766 898 ntBASIC5.88□□□□□ -1.47
CALR3Q96L12 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CALR3Q96L12 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CALR3Q96L12 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CALR3Q96L12 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CALR3Q96L12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CALR3Q96L12 AL049641.1-201ENST00000441055 1948 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CALR3Q96L12 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 RNU6-371P-201ENST00000364283 108 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 RNU6-214P-201ENST00000384130 107 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 AC097374.1-203ENST00000400783 485 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AL035666.1-201ENST00000446195 348 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 H2AFZP5-201ENST00000446960 382 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 MTND5P22-201ENST00000458380 195 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 RN7SKP295-201ENST00000517264 153 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.87□□□□□ -1.47
CALR3Q96L12 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.87□□□□□ -1.47
CALR3Q96L12 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.87□□□□□ -1.47
CALR3Q96L12 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.87□□□□□ -1.47
CALR3Q96L12 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
CALR3Q96L12 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.87□□□□□ -1.47
CALR3Q96L12 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CALR3Q96L12 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms