Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.6□□□□□ -1.83
LDB1Q86U70 BNIP3P23-201ENST00000599655 511 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AC006077.1-201ENST00000604746 343 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AL109618.2-201ENST00000605527 211 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 TUG1_1.1-201ENST00000610654 145 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 AL732372.2-225ENST00000642124 456 ntBASIC3.6□□□□□ -1.83
LDB1Q86U70 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.6□□□□□ -1.83
LDB1Q86U70 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LDB1Q86U70 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
LDB1Q86U70 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 RNU6-553P-201ENST00000364047 96 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 RNU6-660P-201ENST00000364566 109 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC025750.1-201ENST00000399891 379 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AL590704.1-201ENST00000402856 794 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 MTHFD2P2-201ENST00000407725 247 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 RPL36AP36-201ENST00000418616 301 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 DBIP2-201ENST00000419076 262 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AL831737.1-201ENST00000441288 271 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AL359073.1-201ENST00000448036 403 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AP000542.1-201ENST00000448473 371 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 RPL30P9-201ENST00000465586 330 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC034222.1-201ENST00000494052 532 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC096751.1-202ENST00000502691 1067 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC112198.1-201ENST00000505369 1220 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC004062.1-201ENST00000509926 645 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC017037.2-201ENST00000513850 890 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 RNU6-759P-201ENST00000516740 103 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC012435.1-202ENST00000568772 240 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AP001004.1-201ENST00000582468 324 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB1Q86U70 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC013444.2-201ENST00000603317 787 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC006254.3-201ENST00000603353 884 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC011451.2-201ENST00000604303 598 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC107214.2-201ENST00000608204 634 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 AC015967.1-201ENST00000619893 476 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC002550.2-201ENST00000621246 394 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LDB1Q86U70 AL732618.1-201ENST00000623251 301 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 AC127502.3-201ENST00000636170 1206 ntBASIC3.59□□□□□ -1.83
LDB1Q86U70 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB1Q86U70 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
LDB1Q86U70 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LDB1Q86U70 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.59□□□□□ -1.84
LDB1Q86U70 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 RNA5SP124-201ENST00000362739 110 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 SNORD116-8-201ENST00000384365 95 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB1Q86U70 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 RN7SKP159-201ENST00000410657 292 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 CYCSP19-201ENST00000411715 316 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 VDAC1P3-201ENST00000434069 851 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 RSU1P2-202ENST00000437884 485 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AL445567.1-201ENST00000439121 144 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AL121871.1-201ENST00000443413 436 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 NOTCH2P1-201ENST00000443481 624 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB1Q86U70 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB1Q86U70 SNORD121B-201ENST00000458838 81 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 snoU13.4-201ENST00000458916 104 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC021678.1-201ENST00000505195 936 ntBASIC3.58□□□□□ -1.84
LDB1Q86U70 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms