Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USP43Q70EL4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.71□□□□□ -1.82
USP43Q70EL4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USP43Q70EL4 TEX21P-201ENST00000447107 1476 ntBASIC3.71□□□□□ -1.82
USP43Q70EL4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USP43Q70EL4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
USP43Q70EL4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.7□□□□□ -1.82
USP43Q70EL4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
USP43Q70EL4 RNU6-374P-201ENST00000364146 108 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 MIR23B-201ENST00000384832 97 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AL161909.1-201ENST00000397390 712 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 NDUFA5P4-201ENST00000436704 385 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC092809.1-201ENST00000441469 474 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 MTATP6P30-201ENST00000443540 664 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 NUTF2P3-201ENST00000448540 384 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 RPL23AP35-201ENST00000451906 501 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC005229.2-201ENST00000456995 399 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.7□□□□□ -1.82
USP43Q70EL4 RPL30P9-201ENST00000465586 330 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 RPL23AP14-201ENST00000468281 468 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC091133.4-201ENST00000511142 308 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 RNU6-358P-201ENST00000516564 75 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC022790.1-201ENST00000522872 204 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.7□□□□□ -1.82
USP43Q70EL4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AL442663.2-201ENST00000554385 511 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC011477.5-201ENST00000586571 259 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AP000860.1-201ENST00000605250 559 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.7□□□□□ -1.82
USP43Q70EL4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 AC055764.2-201ENST00000610089 670 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 Y_RNA.812-201ENST00000610788 101 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC012531.5-201ENST00000611375 151 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 Y_RNA.784-201ENST00000613803 101 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AL442067.2-201ENST00000614033 363 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AC009233.1-201ENST00000616477 371 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 Y_RNA.787-201ENST00000616522 101 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 Y_RNA.780-201ENST00000617336 101 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 uc_338.9-201ENST00000617424 182 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 Y_RNA.801-201ENST00000619005 101 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 C2orf27A-204ENST00000623058 969 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 AP000843.1-201ENST00000624880 701 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 ATE1-AS1-202ENST00000636460 506 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 AL079343.1-201ENST00000572358 1771 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 PABPC1P9-201ENST00000426076 1612 ntBASIC3.7□□□□□ -1.82
USP43Q70EL4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
USP43Q70EL4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.7□□□□□ -1.82
USP43Q70EL4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP43Q70EL4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.69□□□□□ -1.82
USP43Q70EL4 FRG1BP-201ENST00000278882 761 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 FRG1CP-201ENST00000358464 769 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNU4-73P-201ENST00000363164 141 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNU6-839P-201ENST00000363347 108 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 Y_RNA.295-201ENST00000364918 102 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 MT-TD-201ENST00000387419 68 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNU6-876P-201ENST00000391295 104 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
USP43Q70EL4 CCNG1P1-201ENST00000406783 885 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 RNU2-42P-201ENST00000410697 113 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 OR51A3P-201ENST00000413596 924 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.69□□□□□ -1.82
USP43Q70EL4 RPL7AP25-201ENST00000423357 805 ntBASIC3.69□□□□□ -1.82
USP43Q70EL4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.69□□□□□ -1.82
USP43Q70EL4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms