Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC110743.1-201ENST00000584870 478 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AF038458.1-201ENST00000588406 262 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC087588.2-201ENST00000617667 426 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 uc_338.11-201ENST00000619132 160 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC121333.1-201ENST00000567488 2709 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 BDP1P-201ENST00000582658 1990 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 Y_RNA.148-201ENST00000363557 117 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNU1-43P-201ENST00000365052 165 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNU6-61P-201ENST00000365528 109 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNU6-171P-201ENST00000384354 107 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 MIR568-201ENST00000385036 95 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 U3.29-201ENST00000391296 212 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP107-201ENST00000411358 122 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 POLHP1-201ENST00000411806 470 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC093106.2-201ENST00000428212 385 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 FABP7P2-201ENST00000429946 379 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 EZH2P1-201ENST00000431167 291 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RPS29P10-201ENST00000439197 166 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 Z95327.1-201ENST00000446082 482 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC239809.1-201ENST00000450470 217 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC108751.2-201ENST00000469993 231 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RN7SL591P-201ENST00000496150 292 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC104806.1-201ENST00000508720 308 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC006427.1-201ENST00000514359 712 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RFPL4AP5-201ENST00000514977 504 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP249-201ENST00000516127 99 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP34-201ENST00000516887 130 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RN7SKP295-201ENST00000517264 153 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 RANP9-201ENST00000519957 271 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC024940.3-201ENST00000538551 316 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC138761.3-201ENST00000579993 334 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AL451044.1-201ENST00000604867 238 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC005014.2-201ENST00000607795 599 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AL512624.1-201ENST00000613638 469 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AL713922.2-201ENST00000619384 716 ntBASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF111Q6ZNA4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 ZNF734P-201ENST00000419494 1534 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 U3.2-201ENST00000362981 210 ntBASIC4.87□□□□□ -1.63
RNF111Q6ZNA4 Y_RNA.112-201ENST00000363250 102 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms