Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 TTC39CP1-201ENST00000512513 755 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNU6-928P-201ENST00000516876 104 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 SCARNA1-201ENST00000517138 166 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 DNAJC8P1-201ENST00000554535 372 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 GLUD1P4-201ENST00000590914 418 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AP003122.6-201ENST00000623831 495 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNA5SP196-201ENST00000625967 102 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC099063.3-201ENST00000642066 185 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 OR5H6-203ENST00000642105 978 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AP000526.1-201ENST00000603308 1388 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 DDX43P2-201ENST00000604753 1354 ntBASIC3.36□□□□□ -1.87
C11orf88Q6PI97 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C11orf88Q6PI97 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 RNU6-584P-201ENST00000410350 95 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 RN7SKP33-201ENST00000410942 340 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 SSR1P2-201ENST00000415208 787 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 HIGD1AP4-201ENST00000430194 280 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 SKP1P1-201ENST00000438081 489 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AL117351.1-201ENST00000438864 766 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 HMGB1P37-201ENST00000439613 609 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 RPL23AP35-201ENST00000451906 501 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC004801.2-202ENST00000463559 283 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 KCTD9P5-201ENST00000504141 1170 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC112198.1-201ENST00000505369 1220 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 HMGN1P28-201ENST00000521340 364 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AL133271.1-201ENST00000538229 291 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC007349.4-201ENST00000608114 532 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC009039.2-201ENST00000624524 529 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 AC011477.1-204ENST00000623416 1325 ntBASIC3.35□□□□□ -1.87
C11orf88Q6PI97 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.35□□□□□ -1.87
C11orf88Q6PI97 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RNU6-359P-201ENST00000365466 108 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 OR4C10P-201ENST00000434991 931 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC084290.1-201ENST00000434995 374 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 UBDP1-202ENST00000457888 382 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RPL38P1-201ENST00000460914 211 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AF213884.1-201ENST00000488102 463 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RN7SL604P-201ENST00000492589 296 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RN7SKP157-201ENST00000516174 282 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 RN7SKP209-201ENST00000516888 304 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AP003497.1-201ENST00000528472 562 ntBASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.34□□□□□ -1.87
C11orf88Q6PI97 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms