Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 AC011460.1-201ENST00000636268 1834 ntBASIC6.52□□□□□ -1.37
RC3H1Q5TC82 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
RC3H1Q5TC82 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AP005432.1-201ENST00000580891 3485 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RNU5A-8P-201ENST00000364102 114 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 SNORA51.6-201ENST00000384151 125 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC110754.1-201ENST00000399740 601 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 MRPS18CP6-201ENST00000423587 223 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 NDUFB4P8-201ENST00000435351 367 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC098831.1-201ENST00000440661 216 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 NOP56P2-201ENST00000447491 769 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 HMGB3P21-201ENST00000452483 547 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RPS24P16-201ENST00000497294 392 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RPS27AP18-201ENST00000515536 459 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC130289.1-201ENST00000577321 73 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 MIR4284-201ENST00000578924 81 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC012433.1-201ENST00000588916 398 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RNF138P2-201ENST00000603490 592 ntBASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RC3H1Q5TC82 AC005225.5-201ENST00000623547 2225 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC092681.1-201ENST00000297369 291 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.64-201ENST00000362845 102 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 SNORD115-7-201ENST00000365306 82 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RNU6-338P-201ENST00000383888 105 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RNU6-921P-201ENST00000384361 107 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 U3.20-201ENST00000390909 217 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RNA5SP219-201ENST00000390940 113 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC108734.1-201ENST00000439549 399 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RNU2-10P-201ENST00000516375 211 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RNU6-307P-201ENST00000516743 106 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 DUX4L52-201ENST00000549363 777 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC006557.5-201ENST00000603126 811 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC020910.3-201ENST00000603701 874 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC104763.2-201ENST00000604179 382 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 HMGB1P50-201ENST00000605814 607 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC010424.2-201ENST00000607594 443 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AL445363.3-201ENST00000623080 671 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 AC104964.3-201ENST00000606115 2860 ntBASIC6.5□□□□□ -1.37
RC3H1Q5TC82 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RC3H1Q5TC82 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 DNM1P47-203ENST00000571780 12667 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.26-201ENST00000362539 101 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RNU6-280P-201ENST00000364145 104 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RN7SKP153-201ENST00000365026 316 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.416-201ENST00000384014 113 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RNU6-125P-201ENST00000384505 107 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 PCNPP3-201ENST00000393579 471 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AL583834.1-201ENST00000406943 343 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms