Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 HMGB1P50-201ENST00000605814 607 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC004825.2-201ENST00000616634 455 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 RNU1-93P-201ENST00000364704 169 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 ATG3P1-201ENST00000419507 911 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 HAUS1P1-201ENST00000505275 832 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MTCYBP20-201ENST00000524239 1129 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC008127.2-201ENST00000549925 1075 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MIR2909-201ENST00000617113 69 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 USP9YP20-201ENST00000419224 558 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC245517.2-201ENST00000442890 346 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC025016.1-201ENST00000616746 682 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 SEPT7P7-201ENST00000420492 1301 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 RNU1-23P-201ENST00000363361 144 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC245054.2-201ENST00000415639 319 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RNU11-2P-201ENST00000516898 142 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 PTP4A1P6-201ENST00000531034 478 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC091834.1-201ENST00000614543 472 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC138627.1-204ENST00000641894 765 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RNU6-30P-201ENST00000384561 107 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 MIR1207-201ENST00000408249 87 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 TATDN1P1-201ENST00000414123 891 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 SETP8-201ENST00000435341 628 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 MTND1P18-201ENST00000448191 573 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AL645939.1-201ENST00000453429 797 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AIG1P1-201ENST00000503376 148 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 SYF2P1-201ENST00000550658 413 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 SULT1C2P2-201ENST00000562517 294 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AL161912.3-201ENST00000605404 628 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC100821.1-201ENST00000523153 2479 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RPL9P7-201ENST00000330965 580 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC007390.1-201ENST00000415722 356 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AL691517.1-201ENST00000440833 1235 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RNA5SP182-201ENST00000516064 82 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 U4.2-201ENST00000618561 85 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RPS7P13-201ENST00000413955 498 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 RPL23AP71-201ENST00000470966 469 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AC015911.5-201ENST00000587076 451 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 AL356266.1-201ENST00000623311 483 ntBASIC1.26□□□□□ -2.21
UBR4Q5T4S7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.26□□□□□ -2.21
UBR4Q5T4S7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AL390023.1-201ENST00000428836 262 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 IPO7P1-201ENST00000442031 636 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AP000873.1-201ENST00000463987 400 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 HMGB1P1-201ENST00000522557 636 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 FAM60DP-201ENST00000524174 632 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 RPL23AP22-201ENST00000437556 453 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AC022790.1-201ENST00000522872 204 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MIR4635-201ENST00000583759 79 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AL356490.1-201ENST00000623079 479 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AC009487.2-201ENST00000420969 6821 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 SNORA11.4-201ENST00000408823 129 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 MIR9-3-201ENST00000385084 90 ntBASIC1.25□□□□□ -2.21
UBR4Q5T4S7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC1.25□□□□□ -2.21
UBR4Q5T4S7 RN7SL633P-201ENST00000488974 297 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms