Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
XPCQ01831 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
XPCQ01831 RNY4P16-201ENST00000364768 94 ntBASIC5.93□□□□□ -1.46
XPCQ01831 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 RNU6-456P-201ENST00000384493 107 ntBASIC5.93□□□□□ -1.46
XPCQ01831 MTND4LP20-201ENST00000402379 270 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC092832.1-201ENST00000422934 400 ntBASIC5.93□□□□□ -1.46
XPCQ01831 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 MTND3P23-201ENST00000431980 347 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 HMGB3P12-201ENST00000438745 556 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 BX276092.4-201ENST00000452056 248 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC008628.2-201ENST00000502605 298 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 RNA5SP497-201ENST00000516081 97 ntBASIC5.93□□□□□ -1.46
XPCQ01831 RN7SKP277-201ENST00000516895 283 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 AP003497.1-201ENST00000528472 562 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC104383.1-201ENST00000530297 370 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 AC015912.2-201ENST00000571053 181 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 AC068790.3-201ENST00000602988 553 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.93□□□□□ -1.46
XPCQ01831 AL121772.2-201ENST00000614331 297 ntBASIC5.93□□□□□ -1.46
XPCQ01831 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.93□□□□□ -1.46
XPCQ01831 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
XPCQ01831 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
XPCQ01831 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.93□□□□□ -1.46
XPCQ01831 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.93□□□□□ -1.46
XPCQ01831 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
XPCQ01831 AC011460.1-201ENST00000636268 1834 ntBASIC5.92□□□□□ -1.46
XPCQ01831 SAGE2P-201ENST00000420011 2126 ntBASIC5.92□□□□□ -1.46
XPCQ01831 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 RNU1-39P-201ENST00000383897 165 ntBASIC5.92□□□□□ -1.46
XPCQ01831 MTATP6P18-201ENST00000417994 673 ntBASIC5.92□□□□□ -1.46
XPCQ01831 ZNF90P2-204ENST00000419323 1075 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.92□□□□□ -1.46
XPCQ01831 PDSS1P1-201ENST00000422953 1114 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC007283.2-201ENST00000424739 197 ntBASIC5.92□□□□□ -1.46
XPCQ01831 EZH2P1-201ENST00000431167 291 ntBASIC5.92□□□□□ -1.46
XPCQ01831 UBE2V1P13-201ENST00000436983 439 ntBASIC5.92□□□□□ -1.46
XPCQ01831 RPL7P54-201ENST00000438336 674 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.92□□□□□ -1.46
XPCQ01831 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.92□□□□□ -1.46
XPCQ01831 AC104308.1-201ENST00000454621 333 ntBASIC5.92□□□□□ -1.46
XPCQ01831 HMGB1P21-201ENST00000502313 581 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC046134.1-201ENST00000514454 666 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC099522.1-202ENST00000514718 367 ntBASIC5.92□□□□□ -1.46
XPCQ01831 RN7SKP82-201ENST00000516786 223 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC022616.3-201ENST00000523940 148 ntBASIC5.92□□□□□ -1.46
XPCQ01831 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 MIR3146-201ENST00000580367 79 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC008739.3-201ENST00000603262 127 ntBASIC5.92□□□□□ -1.46
XPCQ01831 BNIP3P9-201ENST00000603714 553 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC007621.1-201ENST00000604544 437 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC004853.1-201ENST00000604902 698 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC008966.2-201ENST00000606157 453 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC104260.1-201ENST00000616660 539 ntBASIC5.92□□□□□ -1.46
XPCQ01831 AC022140.2-201ENST00000623500 188 ntBASIC5.92□□□□□ -1.46
XPCQ01831 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 MIR3662-201ENST00000637030 95 ntBASIC5.92□□□□□ -1.46
XPCQ01831 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XPCQ01831 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XPCQ01831 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
XPCQ01831 RNU6-1322P-201ENST00000364309 107 ntBASIC5.91□□□□□ -1.46
XPCQ01831 RNU6-169P-201ENST00000365336 107 ntBASIC5.91□□□□□ -1.46
XPCQ01831 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
XPCQ01831 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.91□□□□□ -1.46
XPCQ01831 RPS15AP12-201ENST00000419498 388 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AC012498.1-201ENST00000424037 437 ntBASIC5.91□□□□□ -1.46
XPCQ01831 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.91□□□□□ -1.46
XPCQ01831 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.91□□□□□ -1.46
XPCQ01831 RNU6-420P-201ENST00000458780 107 ntBASIC5.91□□□□□ -1.46
XPCQ01831 MTCYBP18-201ENST00000501056 747 ntBASIC5.91□□□□□ -1.46
XPCQ01831 MTCO3P44-201ENST00000510977 541 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.91□□□□□ -1.46
XPCQ01831 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.91□□□□□ -1.46
XPCQ01831 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.91□□□□□ -1.46
XPCQ01831 DYNLL1P4-201ENST00000549314 266 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.91□□□□□ -1.46
XPCQ01831 AL359212.1-201ENST00000556608 614 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.91□□□□□ -1.46
XPCQ01831 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.91□□□□□ -1.46
XPCQ01831 MIR5685-201ENST00000579080 79 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AL162413.1-201ENST00000603198 110 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AL606490.9-201ENST00000603331 271 ntBASIC5.91□□□□□ -1.46
XPCQ01831 AC009994.1-201ENST00000606889 253 ntBASIC5.91□□□□□ -1.46
XPCQ01831 Y_RNA.804-201ENST00000615262 101 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms