Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 DEFA7P-201ENST00000382676 285 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 AC108667.1-201ENST00000428618 249 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 GSTA11P-201ENST00000452866 669 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 RPS27P27-201ENST00000498779 255 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.9□□□□□ -2.11
ABCA4P78363 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA4P78363 AC007620.3-201ENST00000608131 497 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 BX664608.1-201ENST00000610519 487 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 XPOTP1-201ENST00000443317 2398 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.9□□□□□ -2.11
ABCA4P78363 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.9□□□□□ -2.11
ABCA4P78363 Y_RNA.355-201ENST00000365462 98 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 SNORD88.1-201ENST00000408684 91 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 TAF9P1-201ENST00000445421 515 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 TAF9P2-201ENST00000454958 515 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC117522.2-201ENST00000510049 657 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA4P78363 RNA5SP445-201ENST00000515889 115 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.89□□□□□ -2.11
ABCA4P78363 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA4P78363 AL161912.3-201ENST00000605404 628 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 AC016252.1-201ENST00000609721 474 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 Z99496.1-201ENST00000469424 1477 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ABCA4P78363 MIR518E-201ENST00000385252 88 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA4P78363 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA4P78363 RPS15AP1-201ENST00000457423 391 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 RPL36AP21-201ENST00000490372 323 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 RNU4-60P-201ENST00000517239 135 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA4P78363 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC007536.1-201ENST00000533382 349 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA4P78363 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA4P78363 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA4P78363 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA4P78363 RMST_5.1-201ENST00000618704 126 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 AC015726.3-201ENST00000624501 418 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 MTND5P29-201ENST00000458676 1807 ntBASIC1.89□□□□□ -2.11
ABCA4P78363 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA4P78363 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA4P78363 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA4P78363 RNU1-51P-201ENST00000365345 176 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA4P78363 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.88□□□□□ -2.11
ABCA4P78363 RNU6-1140P-201ENST00000410517 106 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 EI24P1-201ENST00000416584 867 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
ABCA4P78363 Z82205.1-201ENST00000428456 297 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA4P78363 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA4P78363 RPL21P103-201ENST00000479921 488 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 TRAV11-201ENST00000539512 339 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 AC093673.2-201ENST00000609674 331 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AC103710.1-201ENST00000610003 901 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA4P78363 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA4P78363 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA4P78363 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA4P78363 SNORA51.2-201ENST00000364595 132 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 MTND4P11-201ENST00000417020 1058 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA4P78363 RPS15AP28-201ENST00000435088 386 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 HMGB1P45-201ENST00000435986 653 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.88□□□□□ -2.11
ABCA4P78363 RPL36AP33-201ENST00000450395 310 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA4P78363 MTCO3P35-201ENST00000485582 781 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
ABCA4P78363 OR4R2P-201ENST00000530815 597 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 OR4H12P-201ENST00000556269 907 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 MIR548Y-201ENST00000582739 110 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AC091488.1-201ENST00000604239 660 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 AC009831.4-201ENST00000620744 325 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA4P78363 AL359715.4-201ENST00000606629 1436 ntBASIC1.88□□□□□ -2.11
ABCA4P78363 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
ABCA4P78363 RNU6-50P-201ENST00000362356 103 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms