Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-889P-201ENST00000517189 103 ntBASIC1.53□□□□□ -2.16
RPS28P62857 PTS-202ENST00000524931 696 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
RPS28P62857 HPRT1P3-201ENST00000539521 576 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 AC078814.3-201ENST00000553036 491 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.53□□□□□ -2.16
RPS28P62857 AL391261.3-201ENST00000557194 520 ntBASIC1.53□□□□□ -2.16
RPS28P62857 MIR3200-201ENST00000580767 85 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AF186192.2-204ENST00000581667 524 ntBASIC1.53□□□□□ -2.16
RPS28P62857 RN7SL600P-201ENST00000581811 299 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL109918.3-201ENST00000603072 338 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC005034.5-201ENST00000604219 466 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC013553.2-201ENST00000604244 589 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL021997.1-201ENST00000605757 193 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC242628.1-201ENST00000606810 391 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC126915.2-201ENST00000610957 190 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC008498.1-201ENST00000613012 531 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL157817.1-201ENST00000614264 790 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC006213.4-201ENST00000616184 634 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.53□□□□□ -2.16
RPS28P62857 AL356585.4-201ENST00000623078 1229 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AP003400.6-201ENST00000624698 740 ntBASIC1.53□□□□□ -2.16
RPS28P62857 OR4G2P-202ENST00000641004 1759 ntBASIC1.53□□□□□ -2.16
RPS28P62857 AC103710.2-202ENST00000641454 2853 ntBASIC1.53□□□□□ -2.16
RPS28P62857 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RPS28P62857 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPS28P62857 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.17
RPS28P62857 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPS28P62857 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPS28P62857 RNA5SP276-201ENST00000362580 94 ntBASIC1.52□□□□□ -2.17
RPS28P62857 U3.26-201ENST00000391236 204 ntBASIC1.52□□□□□ -2.17
RPS28P62857 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 RNU2-49P-201ENST00000410666 184 ntBASIC1.52□□□□□ -2.17
RPS28P62857 RNA5SP489-201ENST00000410986 109 ntBASIC1.52□□□□□ -2.17
RPS28P62857 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 AIMP1P2-201ENST00000425294 312 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 COX6B1P7-201ENST00000430845 235 ntBASIC1.52□□□□□ -2.17
RPS28P62857 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 AL451074.3-201ENST00000437709 472 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC064862.4-201ENST00000442180 334 ntBASIC1.52□□□□□ -2.17
RPS28P62857 RPL36AP39-201ENST00000445859 318 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AL136380.1-201ENST00000447970 162 ntBASIC1.52□□□□□ -2.17
RPS28P62857 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 RN7SL274P-201ENST00000492268 272 ntBASIC1.52□□□□□ -2.17
RPS28P62857 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 AC020699.1-201ENST00000505161 445 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC006499.2-201ENST00000513470 337 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 AC103783.1-201ENST00000520506 373 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 ZNF705CP-201ENST00000530515 889 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AP001781.1-201ENST00000530977 207 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
RPS28P62857 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 TRAV11-201ENST00000539512 339 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 AC009268.1-201ENST00000561352 1203 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 MIR4299-201ENST00000577899 72 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.52□□□□□ -2.17
RPS28P62857 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 MIR6762-201ENST00000613340 86 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC105227.2-201ENST00000615075 605 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AL450472.3-201ENST00000615578 367 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC090132.2-201ENST00000615881 347 ntBASIC1.52□□□□□ -2.17
RPS28P62857 AC090506.2-201ENST00000624521 419 ntBASIC1.52□□□□□ -2.17
RPS28P62857 MIR7157-201ENST00000635801 60 ntBASIC1.52□□□□□ -2.17
RPS28P62857 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPS28P62857 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.52□□□□□ -2.17
RPS28P62857 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 AC073429.2-201ENST00000569694 1444 ntBASIC1.51□□□□□ -2.17
RPS28P62857 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RPS28P62857 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPS28P62857 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPS28P62857 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 SEC63P2-201ENST00000503863 1939 ntBASIC1.51□□□□□ -2.17
RPS28P62857 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPS28P62857 MIR345-201ENST00000362114 98 ntBASIC1.51□□□□□ -2.17
RPS28P62857 RN7SKP184-201ENST00000362348 333 ntBASIC1.51□□□□□ -2.17
RPS28P62857 RNU4-39P-201ENST00000362455 127 ntBASIC1.51□□□□□ -2.17
RPS28P62857 MIR147B-201ENST00000390185 80 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AL356432.1-201ENST00000405809 419 ntBASIC1.51□□□□□ -2.17
RPS28P62857 U3.36-201ENST00000408418 213 ntBASIC1.51□□□□□ -2.17
RPS28P62857 OR8G2P-201ENST00000412796 908 ntBASIC1.51□□□□□ -2.17
RPS28P62857 TPT1P2-201ENST00000413105 503 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC066692.1-201ENST00000421721 457 ntBASIC1.51□□□□□ -2.17
RPS28P62857 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.51□□□□□ -2.17
RPS28P62857 MTND2P21-201ENST00000436242 1042 ntBASIC1.51□□□□□ -2.17
RPS28P62857 RPS15AP5-201ENST00000436276 388 ntBASIC1.51□□□□□ -2.17
RPS28P62857 THAP5P1-201ENST00000439089 262 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC108734.1-201ENST00000439549 399 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.51□□□□□ -2.17
RPS28P62857 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.51□□□□□ -2.17
RPS28P62857 AC092757.1-201ENST00000467293 467 ntBASIC1.51□□□□□ -2.17
RPS28P62857 NDUFA5P5-201ENST00000468361 342 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms