Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.41□□□□□ -1.86
PEX3P56589 OR4A45P-201ENST00000529954 901 ntBASIC3.41□□□□□ -1.86
PEX3P56589 ZNF705CP-201ENST00000530515 889 ntBASIC3.41□□□□□ -1.86
PEX3P56589 OR8L1P-201ENST00000534005 955 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC092470.1-201ENST00000546187 132 ntBASIC3.41□□□□□ -1.86
PEX3P56589 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.41□□□□□ -1.86
PEX3P56589 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.41□□□□□ -1.86
PEX3P56589 GAS5-AS1-201ENST00000602767 694 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC022022.2-201ENST00000602989 360 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AL451074.6-201ENST00000608512 729 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC063944.3-201ENST00000609969 533 ntBASIC3.41□□□□□ -1.86
PEX3P56589 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
PEX3P56589 AC008083.4-201ENST00000615076 444 ntBASIC3.41□□□□□ -1.86
PEX3P56589 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.41□□□□□ -1.86
PEX3P56589 AC011330.2-201ENST00000621680 635 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC006065.5-201ENST00000623427 349 ntBASIC3.41□□□□□ -1.86
PEX3P56589 MIR4496-201ENST00000635896 61 ntBASIC3.41□□□□□ -1.86
PEX3P56589 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.41□□□□□ -1.86
PEX3P56589 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.41□□□□□ -1.86
PEX3P56589 OR5BR1P-201ENST00000524992 1330 ntBASIC3.41□□□□□ -1.86
PEX3P56589 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.86
PEX3P56589 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
PEX3P56589 RNU6-730P-201ENST00000383954 104 ntBASIC3.4□□□□□ -1.87
PEX3P56589 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PEX3P56589 MTND4P13-201ENST00000402078 1023 ntBASIC3.4□□□□□ -1.87
PEX3P56589 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PEX3P56589 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 MTCYBP24-201ENST00000420387 1106 ntBASIC3.4□□□□□ -1.87
PEX3P56589 OFD1P18Y-201ENST00000420889 959 ntBASIC3.4□□□□□ -1.87
PEX3P56589 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.4□□□□□ -1.87
PEX3P56589 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 AL138799.3-201ENST00000438968 350 ntBASIC3.4□□□□□ -1.87
PEX3P56589 MTND2P20-201ENST00000440805 661 ntBASIC3.4□□□□□ -1.87
PEX3P56589 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.4□□□□□ -1.87
PEX3P56589 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.4□□□□□ -1.87
PEX3P56589 RPS20P32-201ENST00000456044 356 ntBASIC3.4□□□□□ -1.87
PEX3P56589 SNORD108-201ENST00000459332 71 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
PEX3P56589 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 OR5H5P-201ENST00000503164 928 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC091951.3-201ENST00000504093 246 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC104090.1-201ENST00000506341 1171 ntBASIC3.4□□□□□ -1.87
PEX3P56589 MTCO1P24-201ENST00000515438 1558 ntBASIC3.4□□□□□ -1.87
PEX3P56589 RN7SKP287-201ENST00000516546 266 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.4□□□□□ -1.87
PEX3P56589 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.4□□□□□ -1.87
PEX3P56589 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.4□□□□□ -1.87
PEX3P56589 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 AC090502.2-201ENST00000549267 280 ntBASIC3.4□□□□□ -1.87
PEX3P56589 NBEAP1-201ENST00000554452 979 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
PEX3P56589 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PEX3P56589 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.4□□□□□ -1.87
PEX3P56589 AC113368.1-201ENST00000603736 382 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC080013.3-201ENST00000606839 578 ntBASIC3.4□□□□□ -1.87
PEX3P56589 AC109809.1-201ENST00000619665 545 ntBASIC3.4□□□□□ -1.87
PEX3P56589 MIR4278-201ENST00000636094 69 ntBASIC3.4□□□□□ -1.87
PEX3P56589 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PEX3P56589 DCAF13P1-201ENST00000495256 1330 ntBASIC3.4□□□□□ -1.87
PEX3P56589 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PEX3P56589 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
PEX3P56589 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 AC021755.1-201ENST00000559747 1447 ntBASIC3.39□□□□□ -1.87
PEX3P56589 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 MIR422A-201ENST00000362286 90 ntBASIC3.39□□□□□ -1.87
PEX3P56589 Y_RNA.25-201ENST00000362528 102 ntBASIC3.39□□□□□ -1.87
PEX3P56589 RNA5SP383-201ENST00000362934 120 ntBASIC3.39□□□□□ -1.87
PEX3P56589 SNORA51.6-201ENST00000384151 125 ntBASIC3.39□□□□□ -1.87
PEX3P56589 SNORA54-201ENST00000384281 123 ntBASIC3.39□□□□□ -1.87
PEX3P56589 Y_RNA.465-201ENST00000384293 102 ntBASIC3.39□□□□□ -1.87
PEX3P56589 MTCO2P21-201ENST00000419780 677 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.39□□□□□ -1.87
PEX3P56589 OR51AB1P-201ENST00000429046 620 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 RPL23AP83-201ENST00000434984 473 ntBASIC3.39□□□□□ -1.87
PEX3P56589 FGF7P5-201ENST00000441829 291 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AP001992.1-205ENST00000462248 379 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC146507.1-201ENST00000468335 354 ntBASIC3.39□□□□□ -1.87
PEX3P56589 PABPC1P3-201ENST00000469174 459 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC013828.1-201ENST00000481845 158 ntBASIC3.39□□□□□ -1.87
PEX3P56589 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
PEX3P56589 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms