Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 AC012618.3-205ENST00000637896 1496 ntBASIC4.11□□□□□ -1.75
SUMO3P55854 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
SUMO3P55854 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.11□□□□□ -1.75
SUMO3P55854 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SUMO3P55854 PNPT1P2-201ENST00000456768 2050 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SUMO3P55854 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SUMO3P55854 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SUMO3P55854 Y_RNA.159-201ENST00000363674 87 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 Y_RNA.372-201ENST00000365599 102 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 MIR937-201ENST00000401271 86 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 CIR1P3-201ENST00000405137 479 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 MTATP6P18-201ENST00000417994 673 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 MTATP6P4-201ENST00000427725 675 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC079780.1-201ENST00000428259 207 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.1□□□□□ -1.75
SUMO3P55854 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 FGF7P6-202ENST00000451282 293 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC012671.1-201ENST00000451912 203 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 SNORD97-201ENST00000459187 142 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC008481.1-201ENST00000463278 396 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 RN7SL354P-201ENST00000469282 294 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 RPS27AP1-201ENST00000475545 471 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 ARL4AP2-201ENST00000507378 601 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.1□□□□□ -1.75
SUMO3P55854 SCARNA24.1-201ENST00000516465 137 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 RNU7-51P-201ENST00000516560 62 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 RNU6-410P-201ENST00000517006 107 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.1□□□□□ -1.75
SUMO3P55854 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.1□□□□□ -1.75
SUMO3P55854 AL359212.1-201ENST00000556608 614 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.1□□□□□ -1.75
SUMO3P55854 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC098848.2-201ENST00000588023 330 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC006116.10-201ENST00000591836 581 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AL606834.2-201ENST00000602954 668 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC012443.1-201ENST00000605605 231 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AP002360.3-201ENST00000607673 710 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SUMO3P55854 AC005086.4-201ENST00000623065 213 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 AC138649.5-201ENST00000637456 137 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SUMO3P55854 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.1□□□□□ -1.75
SUMO3P55854 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.1□□□□□ -1.75
SUMO3P55854 ELF2P3-201ENST00000445099 1506 ntBASIC4.1□□□□□ -1.75
SUMO3P55854 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SUMO3P55854 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
SUMO3P55854 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SUMO3P55854 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 RNU6-1120P-201ENST00000362988 108 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RNU6-1085P-201ENST00000363576 107 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RN7SKP44-201ENST00000363602 316 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 Y_RNA.481-201ENST00000384373 102 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 MIR129-1-201ENST00000384972 72 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC097374.1-203ENST00000400783 485 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 BTF3P7-201ENST00000407097 488 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RN7SKP177-201ENST00000410567 355 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 SNORA74C-2-201ENST00000411179 201 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.09□□□□□ -1.75
SUMO3P55854 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.09□□□□□ -1.75
SUMO3P55854 OR2AS1P-201ENST00000427827 319 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC024082.2-201ENST00000434771 238 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.09□□□□□ -1.75
SUMO3P55854 RPS4XP4-201ENST00000443195 763 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 MTATP6P30-201ENST00000443540 664 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RPL23AP43-201ENST00000446445 471 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SUMO3P55854 MTND2P24-201ENST00000453434 806 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.09□□□□□ -1.75
SUMO3P55854 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SUMO3P55854 AL672167.3-201ENST00000465951 960 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RPS23P1-201ENST00000491662 432 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC004062.1-201ENST00000509926 645 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC005921.1-201ENST00000510589 286 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC015795.1-201ENST00000513669 327 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 AC010342.1-201ENST00000514047 877 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 RNU6-1178P-201ENST00000516674 107 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 SNORA31.22-201ENST00000517204 135 ntBASIC4.09□□□□□ -1.75
SUMO3P55854 HMGB1P19-201ENST00000517578 577 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms