Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 FTH1P25-201ENST00000447665 469 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 SNORD11.1-201ENST00000459482 85 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AC005410.1-202ENST00000460347 485 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AC113347.3-201ENST00000509113 148 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HMGCS2P54868 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 RNU6-885P-201ENST00000516607 104 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AGGF1P8-201ENST00000562979 1000 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 MTATP6P24-201ENST00000576835 677 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 MIR3912-201ENST00000577566 105 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AC016877.3-201ENST00000606778 504 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AC103710.3-201ENST00000608157 948 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS2P54868 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS2P54868 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS2P54868 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS2P54868 ZNF663P-202ENST00000641770 1131 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS2P54868 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HMGCS2P54868 SEPT7P7-201ENST00000420492 1301 ntBASIC3.37□□□□□ -1.87
HMGCS2P54868 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGCS2P54868 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AC233263.6-201ENST00000631132 1963 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS2P54868 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS2P54868 RNU6-582P-201ENST00000362989 107 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 SNORD116.1-201ENST00000365628 92 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS2P54868 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HMGCS2P54868 SNORD65.1-201ENST00000390889 71 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 HSPE1P26-201ENST00000405341 275 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AL139098.1-201ENST00000407291 389 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 Z98941.1-201ENST00000407764 100 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RNU2-52P-201ENST00000410680 190 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RN7SKP284-201ENST00000411002 343 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS2P54868 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AC127526.1-201ENST00000417526 366 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGCS2P54868 MTCYBP24-201ENST00000420387 1106 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 SNORD109B-201ENST00000458961 67 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 SNORD109A-201ENST00000459128 67 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AC114322.1-201ENST00000506771 926 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC034159.1-201ENST00000513885 583 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RNU6-311P-201ENST00000516224 102 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AP001636.2-201ENST00000525517 696 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS2P54868 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGCS2P54868 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGCS2P54868 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGCS2P54868 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HMGCS2P54868 PLCE1P1-201ENST00000622094 305 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 AF127577.6-201ENST00000623352 2191 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 RPS4XP5-202ENST00000449995 1334 ntBASIC3.36□□□□□ -1.87
HMGCS2P54868 PABPC1P7-201ENST00000413177 1513 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 MTND5P28-201ENST00000438005 1594 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 SRP72P2-201ENST00000344851 1979 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AC006960.1-201ENST00000419980 153 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 MTND2P16-201ENST00000419987 799 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGCS2P54868 AC019097.1-201ENST00000424783 735 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 RPP40P1-201ENST00000426762 456 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGCS2P54868 MTCO1P3-201ENST00000429327 192 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 CR769776.1-201ENST00000441254 787 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 AL162389.1-201ENST00000449233 177 ntBASIC3.35□□□□□ -1.87
HMGCS2P54868 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms