Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC044913.1-201ENST00000557200 430 ntBASIC2.52□□□□□ -2.01
NUP98P52948 MTND4LP24-201ENST00000572277 291 ntBASIC2.52□□□□□ -2.01
NUP98P52948 MIR548Y-201ENST00000582739 110 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC093673.2-201ENST00000609674 331 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC022079.2-201ENST00000619739 566 ntBASIC2.52□□□□□ -2.01
NUP98P52948 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC244517.1-201ENST00000606030 2086 ntBASIC2.52□□□□□ -2.01
NUP98P52948 RNU6-1159P-201ENST00000362933 107 ntBASIC2.52□□□□□ -2.01
NUP98P52948 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.52□□□□□ -2.01
NUP98P52948 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC073310.1-201ENST00000423226 1033 ntBASIC2.52□□□□□ -2.01
NUP98P52948 ARL5AP2-201ENST00000444698 533 ntBASIC2.52□□□□□ -2.01
NUP98P52948 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.52□□□□□ -2.01
NUP98P52948 AC233279.1-201ENST00000455300 423 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC021087.2-201ENST00000504656 1203 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.52□□□□□ -2.01
NUP98P52948 ZNF192P1-203ENST00000565888 810 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AP001180.3-201ENST00000582221 145 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC013562.2-201ENST00000611632 603 ntBASIC2.52□□□□□ -2.01
NUP98P52948 AC091834.1-201ENST00000614543 472 ntBASIC2.52□□□□□ -2.01
NUP98P52948 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
NUP98P52948 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP98P52948 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP98P52948 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP98P52948 AL359893.1-201ENST00000447628 1580 ntBASIC2.51□□□□□ -2.01
NUP98P52948 AC000367.1-201ENST00000452711 1766 ntBASIC2.51□□□□□ -2.01
NUP98P52948 RNA5SP295-201ENST00000362655 121 ntBASIC2.51□□□□□ -2.01
NUP98P52948 RN7SKP226-201ENST00000364912 300 ntBASIC2.51□□□□□ -2.01
NUP98P52948 VTA1P1-201ENST00000414044 866 ntBASIC2.51□□□□□ -2.01
NUP98P52948 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP98P52948 SRIP2-201ENST00000428470 166 ntBASIC2.51□□□□□ -2.01
NUP98P52948 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
NUP98P52948 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.51□□□□□ -2.01
NUP98P52948 RPL5P13-201ENST00000462840 709 ntBASIC2.51□□□□□ -2.01
NUP98P52948 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.51□□□□□ -2.01
NUP98P52948 AC110588.1-201ENST00000559699 137 ntBASIC2.51□□□□□ -2.01
NUP98P52948 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP98P52948 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.51□□□□□ -2.01
NUP98P52948 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
NUP98P52948 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
NUP98P52948 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NUP98P52948 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NUP98P52948 AC091564.4-201ENST00000533934 2194 ntBASIC2.5□□□□□ -2.01
NUP98P52948 HMGB1P13-201ENST00000406019 642 ntBASIC2.5□□□□□ -2.01
NUP98P52948 CR769767.1-201ENST00000436337 346 ntBASIC2.5□□□□□ -2.01
NUP98P52948 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NUP98P52948 AC104435.1-201ENST00000483483 166 ntBASIC2.5□□□□□ -2.01
NUP98P52948 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.5□□□□□ -2.01
NUP98P52948 IGHV3-76-201ENST00000522465 295 ntBASIC2.5□□□□□ -2.01
NUP98P52948 AC008083.2-201ENST00000546707 476 ntBASIC2.5□□□□□ -2.01
NUP98P52948 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.5□□□□□ -2.01
NUP98P52948 PCNAP1-202ENST00000595299 752 ntBASIC2.5□□□□□ -2.01
NUP98P52948 AC055764.2-201ENST00000610089 670 ntBASIC2.5□□□□□ -2.01
NUP98P52948 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.5□□□□□ -2.01
NUP98P52948 AC092447.7-201ENST00000422212 1621 ntBASIC2.5□□□□□ -2.01
NUP98P52948 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NUP98P52948 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NUP98P52948 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NUP98P52948 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
NUP98P52948 RNU1-17P-201ENST00000363022 152 ntBASIC2.49□□□□□ -2.01
NUP98P52948 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.49□□□□□ -2.01
NUP98P52948 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.49□□□□□ -2.01
NUP98P52948 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 MRPS33P4-201ENST00000434892 317 ntBASIC2.49□□□□□ -2.01
NUP98P52948 YWHAZP7-201ENST00000436906 631 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AL591719.1-201ENST00000444669 744 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 HMGN2P21-201ENST00000447764 270 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC078918.1-201ENST00000498515 228 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 GNAI2P1-201ENST00000541815 315 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 AC139769.3-201ENST00000618383 175 ntBASIC2.49□□□□□ -2.01
NUP98P52948 MIR4496-201ENST00000635896 61 ntBASIC2.49□□□□□ -2.01
NUP98P52948 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NUP98P52948 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUP98P52948 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.49□□□□□ -2.01
NUP98P52948 FABP5P13-201ENST00000452144 328 ntBASIC2.49□□□□□ -2.01
NUP98P52948 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 RN7SKP210-201ENST00000459176 261 ntBASIC2.49□□□□□ -2.01
NUP98P52948 CKS1BP2-201ENST00000497342 240 ntBASIC2.49□□□□□ -2.01
NUP98P52948 GTF2IP9-201ENST00000502460 301 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.49□□□□□ -2.01
NUP98P52948 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.49□□□□□ -2.01
NUP98P52948 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.49□□□□□ -2.01
NUP98P52948 AP003117.1-201ENST00000602771 554 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC068790.3-201ENST00000602988 553 ntBASIC2.49□□□□□ -2.01
NUP98P52948 AC138649.5-201ENST00000637456 137 ntBASIC2.49□□□□□ -2.01
NUP98P52948 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
NUP98P52948 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NUP98P52948 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.48□□□□□ -2.01
NUP98P52948 Y_RNA.140-201ENST00000363474 103 ntBASIC2.48□□□□□ -2.01
NUP98P52948 RNU6-666P-201ENST00000363499 107 ntBASIC2.48□□□□□ -2.01
NUP98P52948 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.48□□□□□ -2.01
NUP98P52948 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms