Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.48□□□□□ -1.85
GPC3P51654 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.48□□□□□ -1.85
GPC3P51654 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GPC3P51654 CUL1P1-201ENST00000509510 2425 ntBASIC3.48□□□□□ -1.85
GPC3P51654 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.48□□□□□ -1.85
GPC3P51654 SUGT1P1-201ENST00000379514 476 ntBASIC3.48□□□□□ -1.85
GPC3P51654 UBA52P6-201ENST00000399822 382 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GPC3P51654 RAC1P8-201ENST00000427086 527 ntBASIC3.48□□□□□ -1.85
GPC3P51654 RPL21P40-201ENST00000428586 483 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 HMGN1P5-201ENST00000448591 263 ntBASIC3.48□□□□□ -1.85
GPC3P51654 RFC5P1-201ENST00000454419 874 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC011825.1-201ENST00000484967 388 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC008427.1-201ENST00000503102 655 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.48□□□□□ -1.85
GPC3P51654 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 AC008885.1-201ENST00000514930 301 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC104417.1-201ENST00000523974 751 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AP003066.2-201ENST00000529375 555 ntBASIC3.48□□□□□ -1.85
GPC3P51654 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC3P51654 AC090666.1-201ENST00000578241 445 ntBASIC3.48□□□□□ -1.85
GPC3P51654 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 AL136370.1-201ENST00000608166 691 ntBASIC3.48□□□□□ -1.85
GPC3P51654 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.48□□□□□ -1.85
GPC3P51654 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GPC3P51654 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GPC3P51654 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.47□□□□□ -1.85
GPC3P51654 OR5BR1P-201ENST00000524992 1330 ntBASIC3.47□□□□□ -1.85
GPC3P51654 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC3P51654 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.47□□□□□ -1.85
GPC3P51654 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.47□□□□□ -1.85
GPC3P51654 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC3P51654 OR1S2-201ENST00000302592 978 ntBASIC3.47□□□□□ -1.85
GPC3P51654 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC3P51654 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC3P51654 RNU5D-1-201ENST00000363299 116 ntBASIC3.47□□□□□ -1.85
GPC3P51654 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.47□□□□□ -1.85
GPC3P51654 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.47□□□□□ -1.85
GPC3P51654 AC245291.1-201ENST00000419501 328 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC027644.1-201ENST00000419595 298 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.47□□□□□ -1.85
GPC3P51654 DPPA2P1-201ENST00000428060 556 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.47□□□□□ -1.85
GPC3P51654 AC004866.2-201ENST00000438285 481 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC104308.1-201ENST00000454621 333 ntBASIC3.47□□□□□ -1.85
GPC3P51654 MTND2P39-201ENST00000457230 764 ntBASIC3.47□□□□□ -1.85
GPC3P51654 RNA5SP310-201ENST00000459084 116 ntBASIC3.47□□□□□ -1.85
GPC3P51654 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.47□□□□□ -1.85
GPC3P51654 TXNP6-201ENST00000510190 310 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.47□□□□□ -1.85
GPC3P51654 SNORA64.4-201ENST00000516632 81 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.47□□□□□ -1.85
GPC3P51654 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.47□□□□□ -1.85
GPC3P51654 PSMA2P1-201ENST00000526365 646 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.47□□□□□ -1.85
GPC3P51654 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.47□□□□□ -1.85
GPC3P51654 AC091946.2-201ENST00000606105 291 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC091903.1-201ENST00000624322 454 ntBASIC3.47□□□□□ -1.85
GPC3P51654 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.47□□□□□ -1.85
GPC3P51654 MFSD8-245ENST00000641743 948 ntBASIC3.47□□□□□ -1.85
GPC3P51654 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC3P51654 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
GPC3P51654 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
GPC3P51654 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.46□□□□□ -1.85
GPC3P51654 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GPC3P51654 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
GPC3P51654 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
GPC3P51654 RNA5SP383-201ENST00000362934 120 ntBASIC3.46□□□□□ -1.86
GPC3P51654 SNORD56.3-201ENST00000363507 71 ntBASIC3.46□□□□□ -1.86
GPC3P51654 RNU6-1000P-201ENST00000391066 106 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AL138885.1-201ENST00000405921 675 ntBASIC3.46□□□□□ -1.86
GPC3P51654 RPS15AP38-201ENST00000413110 372 ntBASIC3.46□□□□□ -1.86
GPC3P51654 UBE2D3P2-201ENST00000424409 445 ntBASIC3.46□□□□□ -1.86
GPC3P51654 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.46□□□□□ -1.86
GPC3P51654 MTCO1P39-201ENST00000426148 480 ntBASIC3.46□□□□□ -1.86
GPC3P51654 MTATP6P4-201ENST00000427725 675 ntBASIC3.46□□□□□ -1.86
GPC3P51654 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.46□□□□□ -1.86
GPC3P51654 RNF2P1-201ENST00000442955 1010 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.46□□□□□ -1.86
GPC3P51654 VN1R10P-201ENST00000447106 875 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.46□□□□□ -1.86
GPC3P51654 AC244505.3-201ENST00000454598 187 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AC092757.1-201ENST00000467293 467 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.46□□□□□ -1.86
GPC3P51654 AC006483.1-201ENST00000487308 313 ntBASIC3.46□□□□□ -1.86
GPC3P51654 AC093801.2-201ENST00000503966 1050 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms