Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SSXP4-201ENST00000451349 245 ntBASIC3.56□□□□□ -1.84
CDH3P22223 MRPS31P2-201ENST00000451581 518 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 RNU7-125P-201ENST00000458760 62 ntBASIC3.56□□□□□ -1.84
CDH3P22223 RNU7-136P-201ENST00000458819 69 ntBASIC3.56□□□□□ -1.84
CDH3P22223 LINC00888-204ENST00000487386 421 ntBASIC3.56□□□□□ -1.84
CDH3P22223 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.56□□□□□ -1.84
CDH3P22223 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH3P22223 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 AC109635.4-202ENST00000531666 412 ntBASIC3.56□□□□□ -1.84
CDH3P22223 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.56□□□□□ -1.84
CDH3P22223 AC007834.2-201ENST00000536310 343 ntBASIC3.56□□□□□ -1.84
CDH3P22223 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 OSBPL9P5-201ENST00000542581 171 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 MIR4738-201ENST00000579134 87 ntBASIC3.56□□□□□ -1.84
CDH3P22223 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.56□□□□□ -1.84
CDH3P22223 AC011816.2-201ENST00000607089 556 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AC072039.2-201ENST00000608883 439 ntBASIC3.56□□□□□ -1.84
CDH3P22223 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.56□□□□□ -1.84
CDH3P22223 AC091905.1-201ENST00000624400 311 ntBASIC3.56□□□□□ -1.84
CDH3P22223 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
CDH3P22223 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
CDH3P22223 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDH3P22223 NUP58P1-201ENST00000502546 1738 ntBASIC3.56□□□□□ -1.84
CDH3P22223 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH3P22223 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH3P22223 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.55□□□□□ -1.84
CDH3P22223 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH3P22223 RNA5SP51-201ENST00000364750 119 ntBASIC3.55□□□□□ -1.84
CDH3P22223 Y_RNA.493-201ENST00000384422 102 ntBASIC3.55□□□□□ -1.84
CDH3P22223 MIR449B-201ENST00000384995 97 ntBASIC3.55□□□□□ -1.84
CDH3P22223 SOD2P1-201ENST00000396543 562 ntBASIC3.55□□□□□ -1.84
CDH3P22223 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDH3P22223 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 USP9YP26-201ENST00000421008 661 ntBASIC3.55□□□□□ -1.84
CDH3P22223 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 AC091286.1-201ENST00000431233 461 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 HSPD1P21-201ENST00000436541 245 ntBASIC3.55□□□□□ -1.84
CDH3P22223 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH3P22223 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 ARPC3P2-201ENST00000457786 533 ntBASIC3.55□□□□□ -1.84
CDH3P22223 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH3P22223 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH3P22223 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC090453.1-201ENST00000495560 436 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC104685.1-201ENST00000502445 371 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 LTV1P1-201ENST00000510683 1237 ntBASIC3.55□□□□□ -1.84
CDH3P22223 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CDH3P22223 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.55□□□□□ -1.84
CDH3P22223 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH3P22223 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 NDUFB9P3-201ENST00000521269 501 ntBASIC3.55□□□□□ -1.84
CDH3P22223 HSPA8P13-201ENST00000523715 472 ntBASIC3.55□□□□□ -1.84
CDH3P22223 OR7K1P-201ENST00000546439 926 ntBASIC3.55□□□□□ -1.84
CDH3P22223 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH3P22223 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.55□□□□□ -1.84
CDH3P22223 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CDH3P22223 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 AL596327.1-201ENST00000603629 213 ntBASIC3.55□□□□□ -1.84
CDH3P22223 RNU1-30P-201ENST00000606575 163 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC024560.3-201ENST00000608482 349 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AL390240.1-201ENST00000612950 384 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 AC007671.2-201ENST00000637344 619 ntBASIC3.55□□□□□ -1.84
CDH3P22223 AP000553.6-201ENST00000641242 118 ntBASIC3.55□□□□□ -1.84
CDH3P22223 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CDH3P22223 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CDH3P22223 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH3P22223 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 DDX43P2-201ENST00000604753 1354 ntBASIC3.54□□□□□ -1.84
CDH3P22223 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH3P22223 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH3P22223 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDH3P22223 RNU6-989P-201ENST00000362756 107 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RNVU1-3-201ENST00000364313 161 ntBASIC3.54□□□□□ -1.84
CDH3P22223 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RNY3P9-201ENST00000384727 106 ntBASIC3.54□□□□□ -1.84
CDH3P22223 MT-TC-201ENST00000387405 66 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RNA5SP171-201ENST00000391071 115 ntBASIC3.54□□□□□ -1.84
CDH3P22223 U3.29-201ENST00000391296 212 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms