Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MUPP-201ENST00000438111 566 ntBASIC3.65□□□□□ -1.83
CDH1P12830 MTND1P34-201ENST00000438556 671 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AL031667.1-201ENST00000440222 725 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
CDH1P12830 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 CDC27P1-201ENST00000445384 715 ntBASIC3.65□□□□□ -1.83
CDH1P12830 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 HMGB3P21-201ENST00000452483 547 ntBASIC3.65□□□□□ -1.83
CDH1P12830 SSXP1-201ENST00000453640 473 ntBASIC3.65□□□□□ -1.83
CDH1P12830 TPT1P7-201ENST00000458300 517 ntBASIC3.65□□□□□ -1.83
CDH1P12830 PABPC1P3-201ENST00000469174 459 ntBASIC3.65□□□□□ -1.83
CDH1P12830 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC021678.1-201ENST00000505195 936 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 AC002456.2-201ENST00000509356 380 ntBASIC3.65□□□□□ -1.83
CDH1P12830 NDUFB4P9-201ENST00000511646 388 ntBASIC3.65□□□□□ -1.83
CDH1P12830 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH1P12830 AC116347.2-201ENST00000514912 523 ntBASIC3.65□□□□□ -1.83
CDH1P12830 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
CDH1P12830 RNA5SP309-201ENST00000516670 106 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC025881.1-201ENST00000518851 512 ntBASIC3.65□□□□□ -1.83
CDH1P12830 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CDH1P12830 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH1P12830 COX6CP8-201ENST00000522620 226 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH1P12830 AL139174.1-201ENST00000531489 886 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC013828.2-201ENST00000532487 235 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 HSPE1P5-201ENST00000561489 272 ntBASIC3.65□□□□□ -1.83
CDH1P12830 MIR5186-201ENST00000577504 120 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH1P12830 BNIP3P23-201ENST00000599655 511 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC112187.2-201ENST00000604345 283 ntBASIC3.65□□□□□ -1.83
CDH1P12830 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC005344.1-201ENST00000613391 459 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AC027807.2-201ENST00000616099 408 ntBASIC3.65□□□□□ -1.83
CDH1P12830 AL359740.1-201ENST00000624340 592 ntBASIC3.65□□□□□ -1.83
CDH1P12830 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH1P12830 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH1P12830 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CDH1P12830 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH1P12830 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 U8.14-201ENST00000390843 143 ntBASIC3.64□□□□□ -1.83
CDH1P12830 Y_RNA.619-201ENST00000410951 90 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RPS15AP40-201ENST00000419621 391 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 AL445669.1-201ENST00000426743 755 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 GDI2P2-201ENST00000445131 608 ntBASIC3.64□□□□□ -1.83
CDH1P12830 BX322784.1-201ENST00000455793 1077 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC017015.1-201ENST00000477387 286 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RN7SL132P-201ENST00000478131 296 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RNF138P1-201ENST00000502765 546 ntBASIC3.64□□□□□ -1.83
CDH1P12830 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH1P12830 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH1P12830 NPM1P41-201ENST00000512920 831 ntBASIC3.64□□□□□ -1.83
CDH1P12830 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 FABP5P5-201ENST00000515537 406 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC093853.1-201ENST00000515689 483 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RNU6-720P-201ENST00000516363 108 ntBASIC3.64□□□□□ -1.83
CDH1P12830 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH1P12830 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
CDH1P12830 MIR5685-201ENST00000579080 79 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AP001180.3-201ENST00000582221 145 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH1P12830 PRELID3BP8-201ENST00000604148 295 ntBASIC3.64□□□□□ -1.83
CDH1P12830 BCRP9-201ENST00000605312 388 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AL021997.1-201ENST00000605757 193 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC090186.1-201ENST00000605991 572 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC080013.4-201ENST00000607624 649 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AL592295.2-201ENST00000612578 206 ntBASIC3.64□□□□□ -1.83
CDH1P12830 AC015540.1-201ENST00000615828 501 ntBASIC3.64□□□□□ -1.83
CDH1P12830 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH1P12830 C2orf27A-204ENST00000623058 969 ntBASIC3.64□□□□□ -1.83
CDH1P12830 CYP3A51P-201ENST00000633513 256 ntBASIC3.64□□□□□ -1.83
CDH1P12830 FAM157B-203ENST00000639350 358 ntBASIC3.64□□□□□ -1.83
CDH1P12830 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH1P12830 AP004289.2-201ENST00000444413 1457 ntBASIC3.64□□□□□ -1.83
CDH1P12830 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH1P12830 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH1P12830 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH1P12830 AC006378.2-201ENST00000623178 2476 ntBASIC3.64□□□□□ -1.83
CDH1P12830 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
CDH1P12830 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH1P12830 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.63□□□□□ -1.83
CDH1P12830 AC090229.1-201ENST00000590983 1609 ntBASIC3.63□□□□□ -1.83
CDH1P12830 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDH1P12830 TEX21P-201ENST00000447107 1476 ntBASIC3.63□□□□□ -1.83
CDH1P12830 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDH1P12830 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms