Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
TOP1P11387 VPS26AP1-201ENST00000483197 979 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.36□□□□□ -1.87
TOP1P11387 RNA5SP367-201ENST00000516557 118 ntBASIC3.36□□□□□ -1.87
TOP1P11387 FAM60DP-201ENST00000524174 632 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC239860.2-201ENST00000525886 270 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.36□□□□□ -1.87
TOP1P11387 AC083760.1-201ENST00000589621 670 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC012119.1-201ENST00000603184 222 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC144521.1-201ENST00000607148 956 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.36□□□□□ -1.87
TOP1P11387 AC024933.1-201ENST00000608472 348 ntBASIC3.36□□□□□ -1.87
TOP1P11387 AC009570.1-201ENST00000609599 745 ntBASIC3.36□□□□□ -1.87
TOP1P11387 MIR7106-201ENST00000612419 65 ntBASIC3.36□□□□□ -1.87
TOP1P11387 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.36□□□□□ -1.87
TOP1P11387 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TOP1P11387 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.36□□□□□ -1.87
TOP1P11387 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TOP1P11387 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TOP1P11387 CUL1P1-201ENST00000509510 2425 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
TOP1P11387 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOP1P11387 SNORD56.4-201ENST00000363883 71 ntBASIC3.35□□□□□ -1.87
TOP1P11387 RNU6-609P-201ENST00000365459 107 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MIR634-201ENST00000385208 97 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.35□□□□□ -1.87
TOP1P11387 OR51A3P-201ENST00000413596 924 ntBASIC3.35□□□□□ -1.87
TOP1P11387 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.35□□□□□ -1.87
TOP1P11387 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.35□□□□□ -1.87
TOP1P11387 AC093151.1-201ENST00000427711 313 ntBASIC3.35□□□□□ -1.87
TOP1P11387 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.35□□□□□ -1.87
TOP1P11387 RPL23AP31-201ENST00000456160 467 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MLLT10P2-201ENST00000506434 249 ntBASIC3.35□□□□□ -1.87
TOP1P11387 RNU6-416P-201ENST00000516265 103 ntBASIC3.35□□□□□ -1.87
TOP1P11387 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.35□□□□□ -1.87
TOP1P11387 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.35□□□□□ -1.87
TOP1P11387 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
TOP1P11387 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.35□□□□□ -1.87
TOP1P11387 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.35□□□□□ -1.87
TOP1P11387 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.35□□□□□ -1.87
TOP1P11387 AC126177.3-201ENST00000551839 688 ntBASIC3.35□□□□□ -1.87
TOP1P11387 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.35□□□□□ -1.87
TOP1P11387 CYCSP39-201ENST00000565821 309 ntBASIC3.35□□□□□ -1.87
TOP1P11387 AC122134.1-202ENST00000569111 1201 ntBASIC3.35□□□□□ -1.87
TOP1P11387 BPTFP1-201ENST00000579209 492 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TOP1P11387 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.35□□□□□ -1.87
TOP1P11387 AP001330.4-201ENST00000604350 154 ntBASIC3.35□□□□□ -1.87
TOP1P11387 MIR6076-201ENST00000617521 113 ntBASIC3.35□□□□□ -1.87
TOP1P11387 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.35□□□□□ -1.87
TOP1P11387 AC084035.1-201ENST00000634543 607 ntBASIC3.35□□□□□ -1.87
TOP1P11387 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.35□□□□□ -1.87
TOP1P11387 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
TOP1P11387 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.35□□□□□ -1.87
TOP1P11387 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
TOP1P11387 API5P2-201ENST00000397055 1498 ntBASIC3.35□□□□□ -1.87
TOP1P11387 AL049780.3-201ENST00000624612 1583 ntBASIC3.34□□□□□ -1.87
TOP1P11387 OR5J1P-201ENST00000313544 939 ntBASIC3.34□□□□□ -1.87
TOP1P11387 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 RNU6-1074P-201ENST00000383995 104 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AL121978.1-201ENST00000402778 359 ntBASIC3.34□□□□□ -1.87
TOP1P11387 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.34□□□□□ -1.87
TOP1P11387 RNU4-27P-201ENST00000410889 139 ntBASIC3.34□□□□□ -1.87
TOP1P11387 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
TOP1P11387 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.34□□□□□ -1.87
TOP1P11387 AL606495.1-201ENST00000422100 813 ntBASIC3.34□□□□□ -1.87
TOP1P11387 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
TOP1P11387 AL035410.1-201ENST00000427409 427 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AL512637.2-201ENST00000431287 1256 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.34□□□□□ -1.87
TOP1P11387 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.34□□□□□ -1.87
TOP1P11387 MTND2P19-201ENST00000449129 1012 ntBASIC3.34□□□□□ -1.87
TOP1P11387 TRBV26-201ENST00000456572 344 ntBASIC3.34□□□□□ -1.87
TOP1P11387 RPS20P24-201ENST00000457473 361 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.34□□□□□ -1.87
TOP1P11387 AC091826.1-201ENST00000514065 313 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC026801.2-201ENST00000515352 425 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC112198.4-201ENST00000515450 351 ntBASIC3.34□□□□□ -1.87
TOP1P11387 RNU1-103P-201ENST00000516502 125 ntBASIC3.34□□□□□ -1.87
TOP1P11387 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 DNAJC8P1-201ENST00000554535 372 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 AC104229.1-201ENST00000561364 255 ntBASIC3.34□□□□□ -1.87
TOP1P11387 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP1P11387 AC120053.1-201ENST00000607706 736 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC009039.2-201ENST00000624524 529 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.34□□□□□ -1.87
TOP1P11387 AC132825.7-201ENST00000638744 335 ntBASIC3.34□□□□□ -1.87
TOP1P11387 AP002907.1-201ENST00000606361 1430 ntBASIC3.34□□□□□ -1.88
TOP1P11387 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TOP1P11387 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
TOP1P11387 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 SNORA63.3-201ENST00000362682 132 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms