Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SNORA70B-201ENST00000384210 135 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 RNU6-584P-201ENST00000410350 95 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 RN7SKP192-201ENST00000411291 327 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 RNU6-603P-201ENST00000411403 107 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A2P08123 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A2P08123 MTCO2P17-201ENST00000424336 677 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 MTCO2P23-201ENST00000425216 680 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 MTCO1P39-201ENST00000426148 480 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A2P08123 SETP8-201ENST00000435341 628 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A2P08123 RPL21P2-201ENST00000440049 481 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC004854.1-201ENST00000440356 349 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC107398.1-201ENST00000486904 505 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC108729.1-201ENST00000487812 947 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 HMGB1P38-201ENST00000490557 577 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 SUMO2P5-201ENST00000506790 245 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 RNU6-1308P-201ENST00000516817 103 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.68□□□□□ -1.98
COL1A2P08123 AP000916.1-201ENST00000533869 835 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A2P08123 ELOCP31-201ENST00000540463 467 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.68□□□□□ -1.98
COL1A2P08123 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.68□□□□□ -1.98
COL1A2P08123 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A2P08123 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A2P08123 AC123786.2-201ENST00000603459 275 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC010200.2-201ENST00000605098 235 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC021851.1-201ENST00000608537 1082 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC116447.1-201ENST00000613153 453 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AL356274.1-201ENST00000617064 410 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AL512427.1-201ENST00000618593 349 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.68□□□□□ -1.98
COL1A2P08123 AC079228.1-201ENST00000624774 1049 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 AC092447.7-201ENST00000422212 1621 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL1A2P08123 AC008432.1-201ENST00000615912 1320 ntBASIC2.68□□□□□ -1.98
COL1A2P08123 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL1A2P08123 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
COL1A2P08123 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
COL1A2P08123 RNA5SP167-201ENST00000365461 116 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 SNORA41-201ENST00000384675 132 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 RNU6-244P-201ENST00000391028 104 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AL162578.1-201ENST00000406202 378 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 SNORA3.2-201ENST00000408221 125 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 RNU2-17P-201ENST00000410290 190 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A2P08123 AL135786.1-201ENST00000415892 214 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 MTCO1P43-201ENST00000431831 488 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 RPL36AP6-201ENST00000435770 321 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 Z80107.1-201ENST00000436830 412 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 CALM1P2-201ENST00000452941 448 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 AP000873.1-201ENST00000463987 400 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A2P08123 OR5H5P-201ENST00000503164 928 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 TMEM248P1-201ENST00000510579 951 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 AC108471.1-201ENST00000513977 287 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 SNORD116-26-201ENST00000516006 96 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 RN7SKP282-201ENST00000516824 299 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC021269.2-201ENST00000532318 330 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC009063.1-201ENST00000563342 702 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AL049838.1-201ENST00000563647 981 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 MTND1P8-201ENST00000571424 950 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC124016.2-201ENST00000610058 665 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 VN1R9P-201ENST00000614184 867 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 RMST_10.1-201ENST00000616309 154 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 AC008147.4-201ENST00000617570 1204 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC013437.2-201ENST00000639587 677 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
COL1A2P08123 API5P2-201ENST00000397055 1498 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 MTND5P11-201ENST00000511037 1812 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.67□□□□□ -1.98
COL1A2P08123 AC106754.1-201ENST00000562632 1513 ntBASIC2.67□□□□□ -1.98
COL1A2P08123 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A2P08123 AC110774.1-201ENST00000623567 2018 ntBASIC2.66□□□□□ -1.98
COL1A2P08123 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL1A2P08123 MIR142-201ENST00000384835 87 ntBASIC2.66□□□□□ -1.98
COL1A2P08123 AL590290.1-201ENST00000405336 380 ntBASIC2.66□□□□□ -1.98
COL1A2P08123 AL355615.1-201ENST00000406187 641 ntBASIC2.66□□□□□ -1.98
COL1A2P08123 AC096533.1-201ENST00000411645 353 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms