Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC090695.1-201ENST00000561269 1222 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.58□□□□□ -2
COL1A1P02452 AC073387.2-201ENST00000604797 784 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC245517.5-201ENST00000611529 162 ntBASIC2.58□□□□□ -2
COL1A1P02452 AC013562.2-201ENST00000611632 603 ntBASIC2.58□□□□□ -2
COL1A1P02452 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.58□□□□□ -2
COL1A1P02452 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.57□□□□□ -2
COL1A1P02452 RNA5SP189-201ENST00000364920 115 ntBASIC2.57□□□□□ -2
COL1A1P02452 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.57□□□□□ -2
COL1A1P02452 AL353898.1-201ENST00000444055 238 ntBASIC2.57□□□□□ -2
COL1A1P02452 LARP7P4-201ENST00000481075 878 ntBASIC2.57□□□□□ -2
COL1A1P02452 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.57□□□□□ -2
COL1A1P02452 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
COL1A1P02452 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.57□□□□□ -2
COL1A1P02452 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.57□□□□□ -2
COL1A1P02452 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.57□□□□□ -2
COL1A1P02452 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.57□□□□□ -2
COL1A1P02452 LLPHP1-201ENST00000603571 367 ntBASIC2.57□□□□□ -2
COL1A1P02452 AL355816.1-201ENST00000607951 118 ntBASIC2.57□□□□□ -2
COL1A1P02452 AC105429.2-201ENST00000610567 517 ntBASIC2.57□□□□□ -2
COL1A1P02452 AC121761.2-201ENST00000617300 689 ntBASIC2.57□□□□□ -2
COL1A1P02452 uc_338.9-201ENST00000617424 182 ntBASIC2.57□□□□□ -2
COL1A1P02452 AC139769.3-201ENST00000618383 175 ntBASIC2.57□□□□□ -2
COL1A1P02452 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.57□□□□□ -2
COL1A1P02452 SNORA50A-202ENST00000629536 136 ntBASIC2.57□□□□□ -2
COL1A1P02452 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
COL1A1P02452 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
COL1A1P02452 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
COL1A1P02452 MIR153-1-201ENST00000384914 90 ntBASIC2.56□□□□□ -2
COL1A1P02452 SNORA26.7-201ENST00000391288 122 ntBASIC2.56□□□□□ -2
COL1A1P02452 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
COL1A1P02452 BTBD10P2-201ENST00000404779 676 ntBASIC2.56□□□□□ -2
COL1A1P02452 AC073310.1-201ENST00000423226 1033 ntBASIC2.56□□□□□ -2
COL1A1P02452 CR769767.1-201ENST00000436337 346 ntBASIC2.56□□□□□ -2
COL1A1P02452 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL1A1P02452 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.56□□□□□ -2
COL1A1P02452 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL1A1P02452 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.56□□□□□ -2
COL1A1P02452 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
COL1A1P02452 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL1A1P02452 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL1A1P02452 MIR591-201ENST00000385290 95 ntBASIC2.55□□□□□ -2
COL1A1P02452 HMGB1P10-201ENST00000395823 563 ntBASIC2.55□□□□□ -2
COL1A1P02452 RAD23BP2-201ENST00000416003 1207 ntBASIC2.55□□□□□ -2
COL1A1P02452 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.55□□□□□ -2
COL1A1P02452 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.55□□□□□ -2
COL1A1P02452 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.55□□□□□ -2
COL1A1P02452 MTCO1P43-201ENST00000431831 488 ntBASIC2.55□□□□□ -2
COL1A1P02452 RPL21P2-201ENST00000440049 481 ntBASIC2.55□□□□□ -2
COL1A1P02452 RPS27P5-201ENST00000444247 244 ntBASIC2.55□□□□□ -2
COL1A1P02452 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.55□□□□□ -2
COL1A1P02452 MTATP6P22-201ENST00000507369 598 ntBASIC2.55□□□□□ -2
COL1A1P02452 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
COL1A1P02452 AC087241.2-201ENST00000535801 324 ntBASIC2.55□□□□□ -2
COL1A1P02452 OR4U1P-201ENST00000554958 912 ntBASIC2.55□□□□□ -2
COL1A1P02452 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.55□□□□□ -2
COL1A1P02452 LRRC37A5P-203ENST00000580181 585 ntBASIC2.55□□□□□ -2
COL1A1P02452 MIR5002-201ENST00000584713 97 ntBASIC2.55□□□□□ -2
COL1A1P02452 AC090425.2-201ENST00000608818 501 ntBASIC2.55□□□□□ -2
COL1A1P02452 MIR8070-201ENST00000616510 88 ntBASIC2.55□□□□□ -2
COL1A1P02452 AC096656.1-201ENST00000623826 1364 ntBASIC2.55□□□□□ -2
COL1A1P02452 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
COL1A1P02452 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 SNORA80E-201ENST00000384744 137 ntBASIC2.54□□□□□ -2
COL1A1P02452 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 RNA5SP181-201ENST00000410246 98 ntBASIC2.54□□□□□ -2
COL1A1P02452 AC013404.1-201ENST00000413068 249 ntBASIC2.54□□□□□ -2
COL1A1P02452 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.54□□□□□ -2
COL1A1P02452 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.54□□□□□ -2
COL1A1P02452 AC111000.5-201ENST00000506559 1178 ntBASIC2.54□□□□□ -2
COL1A1P02452 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.54□□□□□ -2
COL1A1P02452 AP000889.2-201ENST00000532684 490 ntBASIC2.54□□□□□ -2
COL1A1P02452 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 AC010735.1-201ENST00000567305 1026 ntBASIC2.54□□□□□ -2
COL1A1P02452 ISCA1P3-201ENST00000577104 373 ntBASIC2.54□□□□□ -2
COL1A1P02452 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.54□□□□□ -2
COL1A1P02452 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 AC005156.1-201ENST00000613371 573 ntBASIC2.54□□□□□ -2
COL1A1P02452 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
COL1A1P02452 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.54□□□□□ -2
COL1A1P02452 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL1A1P02452 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
COL1A1P02452 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL1A1P02452 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
COL1A1P02452 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL1A1P02452 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
COL1A1P02452 RNF6P1-201ENST00000444889 1784 ntBASIC2.53□□□□□ -2
COL1A1P02452 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL1A1P02452 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.53□□□□□ -2
COL1A1P02452 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.53□□□□□ -2
COL1A1P02452 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.53□□□□□ -2
COL1A1P02452 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.53□□□□□ -2
COL1A1P02452 AL445646.1-201ENST00000431784 216 ntBASIC2.53□□□□□ -2
COL1A1P02452 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms