Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 U3.29-201ENST00000391296 212 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 MTHFD2P2-201ENST00000407725 247 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 RPS12P23-201ENST00000419579 400 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 OFD1P18Y-201ENST00000420889 959 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC006366.1-201ENST00000422002 759 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC018644.1-201ENST00000429934 551 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCNT1O60563 BMI1P1-201ENST00000445879 941 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 PAXBP1P1-201ENST00000449315 447 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC116337.2-201ENST00000477662 156 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC023424.2-201ENST00000493479 777 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 AC068305.1-201ENST00000497406 726 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 MTCO3P7-201ENST00000510008 774 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 SAP18P1-201ENST00000512058 390 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC024589.1-201ENST00000512207 263 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AF131216.2-201ENST00000512316 564 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 RNU1-95P-201ENST00000516357 160 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 RNU1-128P-201ENST00000516704 160 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 TRMT10BP1-201ENST00000519377 943 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
CCNT1O60563 OR5AP1P-201ENST00000529730 940 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC107016.1-201ENST00000550463 337 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC024909.2-201ENST00000553035 286 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.12□□□□□ -1.75
CCNT1O60563 AC091489.2-201ENST00000566263 604 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNT1O60563 AP000403.1-201ENST00000603349 851 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC010680.4-201ENST00000605334 543 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC012360.2-201ENST00000609349 391 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNT1O60563 AC105429.2-201ENST00000610567 517 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC027807.2-201ENST00000616099 408 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 AC039056.2-201ENST00000622261 511 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNT1O60563 AL732372.2-225ENST00000642124 456 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.12□□□□□ -1.75
CCNT1O60563 AC073073.2-201ENST00000609827 2578 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 ZNF33CP-201ENST00000432492 2030 ntBASIC4.12□□□□□ -1.75
CCNT1O60563 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
CCNT1O60563 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCNT1O60563 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCNT1O60563 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CCNT1O60563 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNT1O60563 ATP5A1P2-201ENST00000412323 255 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC012065.2-201ENST00000421295 375 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AL389915.1-201ENST00000422463 466 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 RPS27AP14-201ENST00000422868 454 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.11□□□□□ -1.75
CCNT1O60563 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNT1O60563 CKS1BP5-201ENST00000434172 273 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNT1O60563 SKP1P1-201ENST00000438081 489 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 MUPP-201ENST00000438111 566 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 COX6CP2-201ENST00000444980 225 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNT1O60563 MTCO3P20-201ENST00000454926 688 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 SNRPGP5-201ENST00000456003 220 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 OR6K1P-201ENST00000456766 971 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 MTCO2P18-201ENST00000457151 658 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCNT1O60563 MTND4P2-201ENST00000507767 1203 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 POU5F1P7-201ENST00000508759 541 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC008489.1-201ENST00000524271 483 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 MED28P5-201ENST00000528254 438 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.11□□□□□ -1.75
CCNT1O60563 OR8L1P-201ENST00000534005 955 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNT1O60563 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNT1O60563 MIR4644-201ENST00000579929 84 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNT1O60563 AC020914.4-201ENST00000597690 277 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 RPL23AP92-201ENST00000603609 255 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC006077.1-201ENST00000604746 343 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 BCRP9-201ENST00000605312 388 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCNT1O60563 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC040168.1-201ENST00000623594 991 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNT1O60563 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNT1O60563 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNT1O60563 AL356473.1-201ENST00000406203 1408 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
CCNT1O60563 PABPC1P7-201ENST00000413177 1513 ntBASIC4.11□□□□□ -1.75
CCNT1O60563 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNT1O60563 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNT1O60563 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNT1O60563 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNT1O60563 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCNT1O60563 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNT1O60563 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNT1O60563 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms