Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB2O43679 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.86□□□□□ -1.79
LDB2O43679 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB2O43679 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB2O43679 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB2O43679 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB2O43679 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.85□□□□□ -1.79
LDB2O43679 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LDB2O43679 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 RNY4P24-201ENST00000362735 96 ntBASIC3.85□□□□□ -1.79
LDB2O43679 RNU6-343P-201ENST00000364709 104 ntBASIC3.85□□□□□ -1.79
LDB2O43679 SNORA62.3-201ENST00000365110 153 ntBASIC3.85□□□□□ -1.79
LDB2O43679 RNU6-533P-201ENST00000384144 107 ntBASIC3.85□□□□□ -1.79
LDB2O43679 RNU6-809P-201ENST00000384461 107 ntBASIC3.85□□□□□ -1.79
LDB2O43679 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 HLFP1-201ENST00000402375 499 ntBASIC3.85□□□□□ -1.79
LDB2O43679 MTCO1P17-201ENST00000411522 491 ntBASIC3.85□□□□□ -1.79
LDB2O43679 FCF1P9-201ENST00000412546 282 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB2O43679 AL445669.1-201ENST00000426743 755 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC104651.1-201ENST00000427559 735 ntBASIC3.85□□□□□ -1.79
LDB2O43679 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.85□□□□□ -1.79
LDB2O43679 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB2O43679 AL590365.1-201ENST00000450788 243 ntBASIC3.85□□□□□ -1.79
LDB2O43679 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB2O43679 KLF3P2-201ENST00000465138 268 ntBASIC3.85□□□□□ -1.79
LDB2O43679 PLGLA-201ENST00000465668 449 ntBASIC3.85□□□□□ -1.79
LDB2O43679 RPL21P129-201ENST00000491732 478 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB2O43679 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 BTF3L4P4-201ENST00000506381 449 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB2O43679 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB2O43679 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 AC010342.1-201ENST00000514047 877 ntBASIC3.85□□□□□ -1.79
LDB2O43679 RNU6-352P-201ENST00000516908 107 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.85□□□□□ -1.79
LDB2O43679 AC113194.1-201ENST00000606037 500 ntBASIC3.85□□□□□ -1.79
LDB2O43679 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 AC138749.5-201ENST00000611461 208 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 AC116165.2-201ENST00000616705 206 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC104010.1-201ENST00000616889 150 ntBASIC3.85□□□□□ -1.79
LDB2O43679 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 AC068137.3-201ENST00000639191 341 ntBASIC3.85□□□□□ -1.79
LDB2O43679 AC073869.6-201ENST00000640656 341 ntBASIC3.85□□□□□ -1.79
LDB2O43679 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
LDB2O43679 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LDB2O43679 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB2O43679 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB2O43679 AC097714.1-201ENST00000511272 1647 ntBASIC3.84□□□□□ -1.79
LDB2O43679 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB2O43679 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 RNA5SP97-201ENST00000365006 84 ntBASIC3.84□□□□□ -1.79
LDB2O43679 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 U1.1-201ENST00000384101 164 ntBASIC3.84□□□□□ -1.79
LDB2O43679 CYCSP19-201ENST00000411715 316 ntBASIC3.84□□□□□ -1.79
LDB2O43679 RAD23BP2-201ENST00000416003 1207 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.84□□□□□ -1.79
LDB2O43679 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB2O43679 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AF228730.2-201ENST00000438784 848 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AC244505.5-201ENST00000443639 207 ntBASIC3.84□□□□□ -1.79
LDB2O43679 RPL7P36-201ENST00000444633 681 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AP000542.1-201ENST00000448473 371 ntBASIC3.84□□□□□ -1.79
LDB2O43679 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 AC005297.2-201ENST00000450430 606 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AL645939.1-201ENST00000453429 797 ntBASIC3.84□□□□□ -1.79
LDB2O43679 BTF3P5-201ENST00000457252 467 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC087312.1-201ENST00000471411 480 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB2O43679 HMGB1P36-201ENST00000487709 576 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC023424.2-201ENST00000493479 777 ntBASIC3.84□□□□□ -1.79
LDB2O43679 HMGB1P21-201ENST00000502313 581 ntBASIC3.84□□□□□ -1.79
LDB2O43679 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
LDB2O43679 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
LDB2O43679 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
LDB2O43679 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.84□□□□□ -1.79
LDB2O43679 AC016957.1-201ENST00000534895 309 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms