Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC163A0A0D9SF12 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
CCDC163A0A0D9SF12 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC163A0A0D9SF12 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC163A0A0D9SF12 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 MTND4P12-201ENST00000498999 1377 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 NOL8P1-201ENST00000508336 3529 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC073343.1-201ENST00000328239 651 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RNY3P3-201ENST00000363816 102 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RNU4-48P-201ENST00000365559 182 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL356776.1-201ENST00000406574 447 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RN7SKP263-201ENST00000411194 309 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 DDX3P2-201ENST00000446138 111 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL162389.1-201ENST00000449233 177 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RPS29P15-201ENST00000458329 171 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RN7SL41P-201ENST00000476144 297 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC126389.1-201ENST00000477436 290 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC114786.4-201ENST00000508771 728 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SNORA40.12-201ENST00000516329 111 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SNORA20.3-201ENST00000516880 132 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-835P-201ENST00000516974 104 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 PHBP17-201ENST00000528576 541 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC084783.1-201ENST00000565846 910 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 MIR5699-201ENST00000578903 90 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC012417.1-201ENST00000582307 1039 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SNORD84-203ENST00000584275 78 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 AC093227.2-201ENST00000589357 285 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 U6.114-201ENST00000636407 96 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 ADAM24P-201ENST00000398655 2101 ntBASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC163A0A0D9SF12 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 RNA5SP509-201ENST00000364577 119 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 OR1L6-202ENST00000373684 1044 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL035079.1-201ENST00000405210 287 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC114491.1-201ENST00000416095 246 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 USP12PX-201ENST00000432383 1057 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC099670.2-201ENST00000435130 321 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 SNRPEP8-201ENST00000442866 260 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 CACYBPP2-201ENST00000453625 678 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 SNORD97-201ENST00000459187 142 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 RPS17P2-201ENST00000461663 408 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC010631.1-201ENST00000474150 156 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 FTH1P9-201ENST00000513251 355 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC046134.1-201ENST00000514454 666 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 LRRC34P2-201ENST00000514850 553 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 RNU6-840P-201ENST00000517275 65 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 LSM3P2-201ENST00000551246 273 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 CBX3P5-201ENST00000552017 521 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 DISC2.1-201ENST00000612827 205 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL713922.2-201ENST00000619384 716 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 MIR6130-201ENST00000619419 109 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AL589994.2-201ENST00000621124 579 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AP005264.7-201ENST00000625003 745 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC055839.1-201ENST00000634467 498 ntBASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC163A0A0D9SF12 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms