Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AP003102.1-201ENST00000525638 661 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC074029.2-201ENST00000551045 634 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 MED28P6-201ENST00000558776 231 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 MIR5186-201ENST00000577504 120 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC012254.4-201ENST00000588843 273 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC040174.2-201ENST00000602701 465 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC009314.1-201ENST00000603871 304 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 DPRXP5-201ENST00000604662 539 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL159169.3-201ENST00000608871 561 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL449363.1-201ENST00000617815 186 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AP006248.3-201ENST00000623580 594 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL160394.1-201ENST00000624765 724 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 DDX10P1-201ENST00000448545 1933 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AC009487.4-201ENST00000624969 3585 ntBASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.16□□□□□ -2.22
LINC01558Q9Y6Z2 AL161912.2-201ENST00000565707 3007 ntBASIC1.15□□□□□ -2.22
LINC01558Q9Y6Z2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
LINC01558Q9Y6Z2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
LINC01558Q9Y6Z2 RNU6-989P-201ENST00000362756 107 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 RNU6-761P-201ENST00000384148 107 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 SNORA54-201ENST00000384281 123 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AL022722.2-201ENST00000402519 180 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 GSTA9P-201ENST00000406231 611 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 RNU4-47P-201ENST00000410876 114 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 RPS20P15-201ENST00000412792 311 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AL445685.2-201ENST00000422551 342 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 XKRYP1-201ENST00000423438 492 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 XKRYP2-201ENST00000432915 492 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 YWHAZP8-201ENST00000436935 731 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 MTCYBP3-201ENST00000445588 1137 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 RPL26P28-201ENST00000451325 435 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 snoU13.28-201ENST00000459235 104 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 KLF3P2-201ENST00000465138 268 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC107626.1-201ENST00000471084 183 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC072039.1-201ENST00000477611 581 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 LINC00888-204ENST00000487386 421 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC020699.1-201ENST00000505161 445 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 CASP1P1-201ENST00000526345 212 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC018630.1-201ENST00000541376 925 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AL049838.1-201ENST00000563647 981 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 FAM60BP-201ENST00000578364 658 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 MIR4287-201ENST00000579398 78 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 MIR5002-201ENST00000584713 97 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC007229.1-201ENST00000590455 412 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 FAM60CP-201ENST00000591086 664 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC135507.1-201ENST00000607214 561 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC004908.2-201ENST00000609090 574 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC107294.1-201ENST00000609524 467 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC109809.1-201ENST00000619665 545 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC015967.1-201ENST00000619893 476 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 MIR7515-201ENST00000637837 67 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 AC103710.2-202ENST00000641454 2853 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 CCT4P2-201ENST00000233836 1548 ntBASIC1.15□□□□□ -2.23
LINC01558Q9Y6Z2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 AC073346.2-201ENST00000624724 2058 ntBASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 AL390862.1-201ENST00000635467 1469 ntBASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 RNA5SP72-201ENST00000364442 117 ntBASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 RN7SKP226-201ENST00000364912 300 ntBASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC01558Q9Y6Z2 USP9YP9-201ENST00000429406 715 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms