Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 SNORA14A-201ENST00000364773 135 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 ATG3P1-201ENST00000419507 911 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 HMGN3P1-201ENST00000453847 193 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC006445.1-201ENST00000491925 405 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC022784.5-201ENST00000522241 437 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 PSMA2P1-201ENST00000526365 646 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 OR8K4P-201ENST00000534608 872 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC125611.2-201ENST00000551907 647 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 VN1R88P-201ENST00000596787 292 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC106791.2-201ENST00000604680 391 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 BNIP3P4-201ENST00000604946 565 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC005000.2-201ENST00000605468 310 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 YPEL5P2-201ENST00000605553 359 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 MIR8057-201ENST00000620957 69 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC080100.1-201ENST00000624239 5356 ntBASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
USH1CQ9Y6N9 AC109315.1-201ENST00000584143 1347 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 RNU6-821P-201ENST00000390995 107 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 RNU6-796P-201ENST00000391086 107 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 CR848007.2-201ENST00000424918 787 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL035410.1-201ENST00000427409 427 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL512649.1-201ENST00000428997 581 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 TRIM60P13-201ENST00000432350 1283 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC104073.1-201ENST00000451988 151 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL109741.2-201ENST00000455561 343 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC015908.1-201ENST00000478739 476 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 SETP6-201ENST00000479329 568 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 RN7SL504P-201ENST00000494496 287 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 OSBPL9P3-201ENST00000534523 595 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC123904.3-201ENST00000547218 814 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AP001330.4-201ENST00000604350 154 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC008277.2-201ENST00000605196 797 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC096586.1-201ENST00000610267 561 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL355810.1-201ENST00000614629 552 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC073968.1-201ENST00000618594 637 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC068722.2-201ENST00000618734 544 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AL360181.4-201ENST00000621752 134 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 MTND5P31-201ENST00000419366 1374 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 AC025263.3-201ENST00000622965 1396 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 ZNF271P-202ENST00000465539 1970 ntBASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USH1CQ9Y6N9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 RNU6-921P-201ENST00000384361 107 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 RNU6-851P-201ENST00000384565 107 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 MIR649-201ENST00000384843 97 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 SNORA48.5-201ENST00000391143 135 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 MTND4LP20-201ENST00000402379 270 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 RNA5SP38-201ENST00000410750 119 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC096664.2-201ENST00000411843 406 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC079780.1-201ENST00000428259 207 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC009961.3-201ENST00000449832 765 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 RNU6-775P-201ENST00000459318 96 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC117522.3-201ENST00000507974 584 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC126177.3-201ENST00000551839 688 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC074051.3-201ENST00000570238 358 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 TPMTP1-201ENST00000592307 737 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC012493.2-201ENST00000595083 291 ntBASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.67□□□□□ -1.98
USH1CQ9Y6N9 KATNBL1P1-201ENST00000605192 748 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms