Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MTND5P42-201ENST00000637720 498 ntBASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.58□□□□□ -1.36
GTF3C3Q9Y5Q9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 RNA5SP39-201ENST00000411245 120 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 RPL30P2-201ENST00000414021 291 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 ARL5AP1-201ENST00000418991 388 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 SETP20-201ENST00000457046 852 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 RPL21P8-201ENST00000465083 535 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AL133445.1-201ENST00000467051 452 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC024558.1-201ENST00000505008 528 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 Y_RNA.689-201ENST00000516589 107 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 IGKV3D-25-201ENST00000519599 235 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AP005435.4-201ENST00000529514 284 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 BNIP3P6-201ENST00000549284 499 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AP005205.1-201ENST00000563503 508 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC012616.1-201ENST00000600294 197 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 DPPA3P3-201ENST00000603842 430 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 BNIP3P10-201ENST00000605360 577 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC007619.2-201ENST00000605743 379 ntBASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
GTF3C3Q9Y5Q9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 SNORA64.3-201ENST00000365647 134 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 RNU6-14P-201ENST00000384630 106 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 HSPE1P8-201ENST00000406997 288 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 RPL7P46-201ENST00000425129 740 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 PRDX3P3-201ENST00000447765 522 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC098847.1-201ENST00000473094 348 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 EIF4EP3-201ENST00000498782 656 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 SNORA70.16-201ENST00000516390 95 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 RN7SKP99-201ENST00000517028 307 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC100770.1-201ENST00000532310 322 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AC008521.1-201ENST00000587471 187 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AL670379.4-201ENST00000605279 254 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 TPTE2P4-201ENST00000258589 1605 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 OR4G1P-203ENST00000641984 1631 ntBASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC6.56□□□□□ -1.36
GTF3C3Q9Y5Q9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC011493.1-201ENST00000596753 1632 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 RHOT1P2-201ENST00000366423 333 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 MIR708-201ENST00000390708 88 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC080125.1-201ENST00000414888 684 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 RPL31P11-202ENST00000454082 372 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AL162395.1-201ENST00000457882 422 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 RPS26P28-201ENST00000470806 348 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC018710.1-201ENST00000506509 158 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 SCARNA18.1-201ENST00000516330 83 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 RNU6-685P-201ENST00000517088 95 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 IGKV2D-19-201ENST00000523346 262 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC069240.1-201ENST00000548774 375 ntBASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.55□□□□□ -1.36
GTF3C3Q9Y5Q9 AL138976.2-201ENST00000563989 694 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms