Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF962P-201ENST00000443465 3140 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC087190.4-201ENST00000574616 8334 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 RNU5E-1-201ENST00000362477 120 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 Y_RNA.248-201ENST00000364501 109 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 MIR192-201ENST00000384915 110 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 BTF3P7-201ENST00000407097 488 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 MIR1179-201ENST00000408703 91 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC245028.1-201ENST00000423259 256 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 RPL23AP1-201ENST00000428990 471 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AL451074.3-201ENST00000437709 472 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 RPL23AP52-201ENST00000439311 478 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 USP9YP15-201ENST00000442391 422 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 HMGB3P22-202ENST00000451823 572 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 MTND1P12-201ENST00000455231 147 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 MTCO2P29-201ENST00000465212 189 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AP001893.2-201ENST00000526949 202 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 FAM92A1P1-201ENST00000528023 890 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC063950.1-201ENST00000552036 308 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 RNA5SP108-201ENST00000605921 117 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC092954.2-201ENST00000609103 430 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC090970.3-201ENST00000612566 866 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 MIR4727-201ENST00000622232 55 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AL356585.4-201ENST00000623078 1229 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AP006248.2-201ENST00000623309 592 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AC140479.6-201ENST00000633535 357 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 AL138713.1-201ENST00000624026 2130 ntBASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHA3Q9Y5H8 ELF2P3-201ENST00000445099 1506 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC025031.4-201ENST00000621248 3271 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 MIR129-1-201ENST00000384972 72 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 RNU4-55P-201ENST00000410731 137 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC092832.1-201ENST00000422934 400 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 MTCO2P11-201ENST00000431069 680 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 MTND4LP10-201ENST00000435146 291 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 RBMX2P4-201ENST00000441256 376 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL451050.1-201ENST00000450126 415 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC133473.1-201ENST00000455173 299 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC013267.1-201ENST00000458227 267 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 RN7SL738P-201ENST00000470264 297 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 RNU6-528P-201ENST00000516926 100 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 ELOCP28-201ENST00000590044 317 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 KC877982.1-201ENST00000602313 470 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL161637.1-201ENST00000622380 412 ntBASIC4.42□□□□□ -1.7
PCDHA3Q9Y5H8 AL445363.3-201ENST00000623080 671 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 158.2 ms