Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX1Q9NZR4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VSX1Q9NZR4 AL442639.1-201ENST00000625030 1899 ntBASIC4.19□□□□□ -1.74
VSX1Q9NZR4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX1Q9NZR4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VSX1Q9NZR4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VSX1Q9NZR4 AC010928.1-201ENST00000592477 1447 ntBASIC4.19□□□□□ -1.74
VSX1Q9NZR4 AL136164.3-201ENST00000624429 3978 ntBASIC4.19□□□□□ -1.74
VSX1Q9NZR4 IRF5P1-201ENST00000504852 2164 ntBASIC4.19□□□□□ -1.74
VSX1Q9NZR4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 OR1S2-201ENST00000302592 978 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 HSPE1P11-201ENST00000339579 310 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNU6-451P-201ENST00000362921 107 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNY3P13-201ENST00000365542 102 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNU1-82P-201ENST00000390851 165 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNU6-1158P-201ENST00000391167 107 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL160275.2-201ENST00000412010 394 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 VDAC1P9-201ENST00000412766 841 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RPS20P5-201ENST00000434808 360 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 PTMAP6-201ENST00000439110 327 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC069285.2-201ENST00000440210 275 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 CEACAMP7-201ENST00000444105 496 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 NANOGP10-201ENST00000453325 895 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC079168.2-201ENST00000453977 416 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNU7-63P-201ENST00000459054 62 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RPS20P20-201ENST00000460498 340 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC021146.1-201ENST00000511202 716 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC010486.1-201ENST00000511793 424 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC005798.1-201ENST00000513715 387 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RNU6-27P-201ENST00000516146 107 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RN7SKP116-201ENST00000516902 319 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AP000857.1-201ENST00000532151 543 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL161713.1-201ENST00000555538 145 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC034105.3-201ENST00000565294 442 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC011712.1-201ENST00000588959 234 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC067852.4-201ENST00000590314 478 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL117336.2-201ENST00000602435 335 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL451044.1-201ENST00000604867 238 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 Z84480.1-201ENST00000605131 311 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL136363.1-201ENST00000605349 337 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 uc_338.11-201ENST00000619132 160 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC024940.5-201ENST00000622889 474 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.18□□□□□ -1.74
VSX1Q9NZR4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VSX1Q9NZR4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RNU4-48P-201ENST00000365559 182 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RNU6-74P-201ENST00000384235 107 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 SNORD96B-201ENST00000386148 79 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RNU6-821P-201ENST00000390995 107 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 AL591848.1-201ENST00000413092 322 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 MED13P1-201ENST00000428342 171 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 BNIP3P2-201ENST00000441221 577 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RPL21P89-201ENST00000444021 467 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.17□□□□□ -1.74
VSX1Q9NZR4 S100A11P1-201ENST00000477525 312 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RPL7AP6-201ENST00000477943 801 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 MTCO1P35-201ENST00000515270 228 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 RN7SKP234-201ENST00000517173 224 ntBASIC4.17□□□□□ -1.74
VSX1Q9NZR4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms