Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC023632.1-201ENST00000518463 375 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AP001207.2-201ENST00000519490 539 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC090502.2-201ENST00000549267 280 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 AC092954.1-201ENST00000609121 445 ntBASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.99□□□□□ -1.93
KLHL28Q9NXS3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC090740.1-201ENST00000623193 2262 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 HMGB1P5-201ENST00000255320 642 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNU6-492P-201ENST00000363035 104 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNU6-1066P-201ENST00000363573 105 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 SNORA1.3-201ENST00000384676 136 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 MIR128-1-201ENST00000384921 82 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RPL5P18-201ENST00000406671 891 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNA5SP229-201ENST00000410809 99 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNU2-72P-201ENST00000411175 163 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC017099.1-201ENST00000448261 1028 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 MRPL42P4-201ENST00000453267 443 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC013828.1-201ENST00000481845 158 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RPL7P38-201ENST00000488396 739 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 CBX3P3-201ENST00000508108 532 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNU1-143P-201ENST00000516296 146 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 snoZ278.1-201ENST00000517059 112 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC044913.1-201ENST00000557200 430 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AP005205.1-201ENST00000563503 508 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC010653.1-201ENST00000571108 881 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AL606834.2-201ENST00000602954 668 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC091946.2-201ENST00000606105 291 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 U1.23-201ENST00000610293 146 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 RNU1-68P-201ENST00000615382 146 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 U1.39-201ENST00000621562 146 ntBASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
KLHL28Q9NXS3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 MTND5P27-201ENST00000428871 1720 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 GNG5P1-201ENST00000255500 204 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 RNU6-657P-201ENST00000383904 107 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 MCTS2P-201ENST00000394552 546 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AL355615.1-201ENST00000406187 641 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 RNU2-28P-201ENST00000410457 189 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 TMEM167AP1-201ENST00000423409 219 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 RPS29P2-201ENST00000479278 136 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC026414.1-201ENST00000504046 698 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 SCARNA20.6-201ENST00000517251 106 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 MED28P6-201ENST00000558776 231 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 DUXAP4-201ENST00000603046 613 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 NUTF2P8-201ENST00000604593 363 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 AC231759.1-201ENST00000616455 597 ntBASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
KLHL28Q9NXS3 ZNF833P-201ENST00000424938 1494 ntBASIC2.96□□□□□ -1.93
KLHL28Q9NXS3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.96□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms