Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNU2-18P-201ENST00000411224 162 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 RN7SL254P-201ENST00000460609 284 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 RN7SL168P-201ENST00000463821 279 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AP002453.1-201ENST00000492327 668 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC018797.1-201ENST00000510791 255 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC090958.1-201ENST00000511122 351 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 RNU6-914P-201ENST00000516749 109 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC007458.1-201ENST00000542812 373 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 HMGN2P47-201ENST00000559378 272 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC018552.1-201ENST00000562099 811 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC120057.2-201ENST00000571520 271 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC104581.2-201ENST00000572227 430 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 OR1E3-201ENST00000575608 948 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 MIR7109-201ENST00000613748 65 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC004852.3-201ENST00000614131 326 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 AC018445.2-201ENST00000622987 260 ntBASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PRDM9Q9NQV7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 BRAFP1-201ENST00000445336 2703 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RN7SKP187-201ENST00000365536 330 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RNU6-937P-201ENST00000384325 106 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.580-201ENST00000391004 95 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RN7SKP151-201ENST00000410230 316 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AL035422.1-201ENST00000414193 397 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 DPPA2P2-201ENST00000418220 897 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RPS6P12-201ENST00000432491 726 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 SNRPCP3-201ENST00000474888 476 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RPL12P30-201ENST00000488389 499 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 HMGN1P11-201ENST00000508668 303 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 CASP1P1-201ENST00000526345 212 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 GSTP1P1-201ENST00000548078 319 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RPL23AP87-202ENST00000573039 466 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 FAM60BP-201ENST00000578364 658 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AC027229.1-201ENST00000583887 253 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AC009314.1-201ENST00000603871 304 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 AP001052.1-201ENST00000626421 99 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
PRDM9Q9NQV7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.82-201ENST00000363000 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.92-201ENST00000363043 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 RNU1-65P-201ENST00000363919 148 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.235-201ENST00000364412 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 SNORA43.1-201ENST00000364863 140 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.306-201ENST00000365015 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.312-201ENST00000365089 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.322-201ENST00000365151 102 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.497-201ENST00000384447 98 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 SNORA12.2-201ENST00000391040 156 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 Y_RNA.590-201ENST00000410140 107 ntBASIC5.87□□□□□ -1.47
PRDM9Q9NQV7 RNU2-61P-201ENST00000411069 191 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms