Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC7.47□□□□□ -1.21
RTN4Q9NQC3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC7.47□□□□□ -1.21
RTN4Q9NQC3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC7.46□□□□□ -1.21
RTN4Q9NQC3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC007685.1-201ENST00000329806 452 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RNA5SP453-201ENST00000362503 119 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RNA5SP301-201ENST00000362537 121 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SKP55-201ENST00000364888 307 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 SNORA5.1-201ENST00000384275 131 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 MRPL32P1-201ENST00000406301 247 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RNU6-1156P-201ENST00000410365 100 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC108032.1-201ENST00000416706 207 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 NUP35P1-201ENST00000422734 947 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SL647P-201ENST00000485429 300 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC139453.3-201ENST00000493276 369 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 SNORA40.14-201ENST00000516543 86 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SKP11-201ENST00000517018 287 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AL133399.1-201ENST00000527476 298 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SL199P-201ENST00000578752 281 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SL656P-201ENST00000579044 281 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC113195.1-201ENST00000579952 141 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 RN7SL404P-201ENST00000582421 281 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AL589765.5-201ENST00000596133 515 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 Z98751.3-201ENST00000604447 521 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AL161420.1-201ENST00000619393 264 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 AC008669.1-201ENST00000565823 2178 ntBASIC7.46□□□□□ -1.22
RTN4Q9NQC3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RTN4Q9NQC3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.556-201ENST00000384677 113 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 RNU6-700P-201ENST00000391043 107 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.618-201ENST00000410949 107 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AC007098.1-201ENST00000420122 367 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 VTI1BP4-201ENST00000427516 527 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 BX323845.3-201ENST00000428215 527 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 RPL3P11-201ENST00000434028 1146 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 RPL37P4-201ENST00000448908 268 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AC112492.4-201ENST00000456549 352 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.687-201ENST00000516558 91 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 RNU4-77P-201ENST00000516692 156 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 HMGN2P36-201ENST00000529541 409 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 CBX3P8-201ENST00000532412 525 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AL161670.1-201ENST00000554348 137 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 RN7SL208P-201ENST00000577964 296 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 MIR3690-201ENST00000580266 75 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 VN1R107P-201ENST00000601784 209 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AL355297.3-201ENST00000604082 446 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AL356585.10-201ENST00000641883 123 ntBASIC7.45□□□□□ -1.22
RTN4Q9NQC3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RTN4Q9NQC3 AL672296.1-201ENST00000427780 2158 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 MTND5P27-201ENST00000428871 1720 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 MTND5P9-201ENST00000503854 1755 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 SNORA70.3-201ENST00000365075 132 ntBASIC7.44□□□□□ -1.22
RTN4Q9NQC3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC7.44□□□□□ -1.22
RTN4Q9NQC3 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms